Experiment: MoLS4 with L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1956 and DVU1958 are separated by 161 nucleotides DVU1958 and DVU1959 are separated by 323 nucleotides
DVU1956: DVU1956 - heptosyltransferase family protein (TIGR), at 2,029,188 to 2,030,243
DVU1956
DVU1958: DVU1958 - sensory box histidine kinase (TIGR), at 2,030,405 to 2,033,002
DVU1958
DVU1959: DVU1959 - EAL domain/GGDEF domain protein (TIGR), at 2,033,326 to 2,035,719
DVU1959
Position (kb)
2030
2031
2032
2033
2034 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2030.318 kb on - strand at 2030.356 kb on - strand at 2030.388 kb on + strand at 2030.424 kb on + strand at 2030.424 kb on + strand at 2030.429 kb on + strand at 2030.440 kb on - strand at 2030.463 kb on + strand at 2030.523 kb on - strand at 2030.531 kb on + strand at 2030.615 kb on + strand at 2030.615 kb on + strand at 2030.615 kb on + strand at 2030.624 kb on - strand at 2030.682 kb on - strand, within DVU1958 at 2030.787 kb on - strand, within DVU1958 at 2030.848 kb on - strand, within DVU1958 at 2031.038 kb on + strand, within DVU1958 at 2031.091 kb on - strand, within DVU1958 at 2031.143 kb on + strand, within DVU1958 at 2031.206 kb on - strand, within DVU1958 at 2031.207 kb on + strand, within DVU1958 at 2031.291 kb on + strand, within DVU1958 at 2031.299 kb on - strand, within DVU1958 at 2031.314 kb on - strand, within DVU1958 at 2031.367 kb on - strand, within DVU1958 at 2031.377 kb on - strand, within DVU1958 at 2031.377 kb on - strand, within DVU1958 at 2031.544 kb on + strand, within DVU1958 at 2031.546 kb on + strand, within DVU1958 at 2031.552 kb on - strand, within DVU1958 at 2031.702 kb on + strand, within DVU1958 at 2031.806 kb on - strand, within DVU1958 at 2031.857 kb on + strand, within DVU1958 at 2031.983 kb on + strand, within DVU1958 at 2032.011 kb on + strand, within DVU1958 at 2032.040 kb on - strand, within DVU1958 at 2032.066 kb on + strand, within DVU1958 at 2032.129 kb on + strand, within DVU1958 at 2032.336 kb on + strand, within DVU1958 at 2032.397 kb on - strand, within DVU1958 at 2032.407 kb on - strand, within DVU1958 at 2032.407 kb on - strand, within DVU1958 at 2032.407 kb on - strand, within DVU1958 at 2032.408 kb on - strand, within DVU1958 at 2032.444 kb on - strand, within DVU1958 at 2032.467 kb on + strand, within DVU1958 at 2032.530 kb on - strand, within DVU1958 at 2032.530 kb on - strand, within DVU1958 at 2032.588 kb on - strand, within DVU1958 at 2032.591 kb on + strand, within DVU1958 at 2032.660 kb on + strand, within DVU1958 at 2032.913 kb on + strand at 2033.051 kb on - strand at 2033.202 kb on + strand at 2033.212 kb on + strand at 2033.241 kb on + strand at 2033.274 kb on + strand at 2033.303 kb on - strand at 2033.424 kb on - strand at 2033.508 kb on + strand at 2033.556 kb on + strand at 2033.571 kb on + strand, within DVU1959 at 2033.586 kb on - strand, within DVU1959 at 2033.605 kb on - strand, within DVU1959 at 2033.701 kb on - strand, within DVU1959 at 2033.743 kb on + strand, within DVU1959 at 2033.751 kb on - strand, within DVU1959 at 2033.784 kb on + strand, within DVU1959 at 2033.917 kb on - strand, within DVU1959 at 2033.917 kb on - strand, within DVU1959 at 2033.926 kb on - strand, within DVU1959 at 2033.986 kb on - strand, within DVU1959
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine (N) remove 2,030,318 - +0.2 2,030,356 - +0.3 2,030,388 + -0.4 2,030,424 + +0.3 2,030,424 + +0.3 2,030,429 + +0.3 2,030,440 - +0.4 2,030,463 + +0.0 2,030,523 - +0.2 2,030,531 + +0.1 2,030,615 + +0.5 2,030,615 + +0.4 2,030,615 + -0.1 2,030,624 - -0.3 2,030,682 - DVU1958 0.11 -0.4 2,030,787 - DVU1958 0.15 +2.1 2,030,848 - DVU1958 0.17 -0.0 2,031,038 + DVU1958 0.24 -0.9 2,031,091 - DVU1958 0.26 -1.0 2,031,143 + DVU1958 0.28 +0.3 2,031,206 - DVU1958 0.31 +0.2 2,031,207 + DVU1958 0.31 -0.0 2,031,291 + DVU1958 0.34 -0.2 2,031,299 - DVU1958 0.34 -0.2 2,031,314 - DVU1958 0.35 +0.1 2,031,367 - DVU1958 0.37 +0.6 2,031,377 - DVU1958 0.37 +0.5 2,031,377 - DVU1958 0.37 +0.8 2,031,544 + DVU1958 0.44 +0.1 2,031,546 + DVU1958 0.44 -0.0 2,031,552 - DVU1958 0.44 +1.7 2,031,702 + DVU1958 0.50 +0.6 2,031,806 - DVU1958 0.54 -0.9 2,031,857 + DVU1958 0.56 +0.2 2,031,983 + DVU1958 0.61 -0.1 2,032,011 + DVU1958 0.62 -0.9 2,032,040 - DVU1958 0.63 +0.1 2,032,066 + DVU1958 0.64 +1.2 2,032,129 + DVU1958 0.66 -2.3 2,032,336 + DVU1958 0.74 +0.7 2,032,397 - DVU1958 0.77 -0.1 2,032,407 - DVU1958 0.77 +0.3 2,032,407 - DVU1958 0.77 +0.5 2,032,407 - DVU1958 0.77 +0.6 2,032,408 - DVU1958 0.77 -0.3 2,032,444 - DVU1958 0.78 +0.9 2,032,467 + DVU1958 0.79 +0.2 2,032,530 - DVU1958 0.82 +0.2 2,032,530 - DVU1958 0.82 +0.6 2,032,588 - DVU1958 0.84 +0.1 2,032,591 + DVU1958 0.84 -0.1 2,032,660 + DVU1958 0.87 -0.2 2,032,913 + +0.4 2,033,051 - -0.1 2,033,202 + -0.0 2,033,212 + -0.1 2,033,241 + -0.5 2,033,274 + -0.1 2,033,303 - +1.0 2,033,424 - -0.3 2,033,508 + -0.5 2,033,556 + -1.2 2,033,571 + DVU1959 0.10 -0.1 2,033,586 - DVU1959 0.11 -0.5 2,033,605 - DVU1959 0.12 +0.0 2,033,701 - DVU1959 0.16 +0.6 2,033,743 + DVU1959 0.17 -1.3 2,033,751 - DVU1959 0.18 +0.4 2,033,784 + DVU1959 0.19 +0.0 2,033,917 - DVU1959 0.25 +0.1 2,033,917 - DVU1959 0.25 +0.1 2,033,926 - DVU1959 0.25 -0.1 2,033,986 - DVU1959 0.28 -0.1
Or see this region's nucleotide sequence