Experiment: MoLS4 with L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1174 and DVU1175 are separated by 36 nucleotides DVU1175 and DVU1176 are separated by 325 nucleotides DVU1176 and DVU1177 are separated by 323 nucleotides
DVU1174: DVU1174 - hypothetical protein (TIGR), at 1,266,446 to 1,266,823
DVU1174
DVU1175: DVU1175 - hypothetical protein (TIGR), at 1,266,860 to 1,267,153
DVU1175
DVU1176: DVU1176 - hypothetical protein (TIGR), at 1,267,479 to 1,268,036
DVU1176
DVU1177: DVU1177 - hypothetical protein (TIGR), at 1,268,360 to 1,269,022
DVU1177
Position (kb)
1267
1268
1269 Strain fitness (log2 ratio)
-2
-1
0
1 at 1266.531 kb on - strand, within DVU1174 at 1266.719 kb on - strand, within DVU1174 at 1266.744 kb on - strand, within DVU1174 at 1266.755 kb on + strand, within DVU1174 at 1266.882 kb on - strand at 1266.976 kb on - strand, within DVU1175 at 1267.029 kb on + strand, within DVU1175 at 1267.340 kb on + strand at 1267.483 kb on - strand at 1267.541 kb on - strand, within DVU1176 at 1267.546 kb on + strand, within DVU1176 at 1267.590 kb on + strand, within DVU1176 at 1267.590 kb on + strand, within DVU1176 at 1267.619 kb on + strand, within DVU1176 at 1267.671 kb on - strand, within DVU1176 at 1267.728 kb on + strand, within DVU1176 at 1267.752 kb on - strand, within DVU1176 at 1267.754 kb on + strand, within DVU1176 at 1267.754 kb on + strand, within DVU1176 at 1267.757 kb on - strand, within DVU1176 at 1267.762 kb on - strand, within DVU1176 at 1267.856 kb on - strand, within DVU1176 at 1267.866 kb on - strand, within DVU1176 at 1267.881 kb on - strand, within DVU1176 at 1267.919 kb on + strand, within DVU1176 at 1267.927 kb on - strand, within DVU1176 at 1267.960 kb on - strand, within DVU1176 at 1267.982 kb on - strand at 1267.993 kb on - strand at 1267.993 kb on - strand at 1268.030 kb on + strand at 1268.030 kb on + strand at 1268.208 kb on + strand at 1268.216 kb on - strand at 1268.216 kb on - strand at 1268.229 kb on + strand at 1268.235 kb on - strand at 1268.267 kb on + strand at 1268.269 kb on + strand at 1268.383 kb on - strand at 1268.422 kb on + strand at 1268.430 kb on - strand, within DVU1177 at 1268.447 kb on + strand, within DVU1177 at 1268.455 kb on - strand, within DVU1177 at 1268.455 kb on - strand, within DVU1177 at 1268.474 kb on - strand, within DVU1177 at 1268.498 kb on - strand, within DVU1177 at 1268.563 kb on + strand, within DVU1177 at 1268.587 kb on - strand, within DVU1177 at 1268.592 kb on - strand, within DVU1177 at 1268.639 kb on - strand, within DVU1177 at 1268.732 kb on - strand, within DVU1177 at 1268.752 kb on + strand, within DVU1177 at 1268.841 kb on - strand, within DVU1177 at 1268.846 kb on - strand, within DVU1177 at 1268.858 kb on - strand, within DVU1177
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine (N) remove 1,266,531 - DVU1174 0.22 +0.5 1,266,719 - DVU1174 0.72 -2.0 1,266,744 - DVU1174 0.79 -0.2 1,266,755 + DVU1174 0.82 -0.1 1,266,882 - -0.1 1,266,976 - DVU1175 0.39 -0.2 1,267,029 + DVU1175 0.57 -2.0 1,267,340 + +0.1 1,267,483 - -1.3 1,267,541 - DVU1176 0.11 -2.1 1,267,546 + DVU1176 0.12 -0.5 1,267,590 + DVU1176 0.20 +1.4 1,267,590 + DVU1176 0.20 -0.4 1,267,619 + DVU1176 0.25 -0.4 1,267,671 - DVU1176 0.34 -0.6 1,267,728 + DVU1176 0.45 -1.9 1,267,752 - DVU1176 0.49 -0.5 1,267,754 + DVU1176 0.49 -0.4 1,267,754 + DVU1176 0.49 -0.3 1,267,757 - DVU1176 0.50 +0.3 1,267,762 - DVU1176 0.51 -0.8 1,267,856 - DVU1176 0.68 -0.6 1,267,866 - DVU1176 0.69 -1.0 1,267,881 - DVU1176 0.72 -0.3 1,267,919 + DVU1176 0.79 +0.1 1,267,927 - DVU1176 0.80 -0.6 1,267,960 - DVU1176 0.86 +0.7 1,267,982 - -1.0 1,267,993 - -0.6 1,267,993 - +0.1 1,268,030 + -0.2 1,268,030 + -0.1 1,268,208 + +0.0 1,268,216 - +0.0 1,268,216 - +0.2 1,268,229 + +0.1 1,268,235 - -0.1 1,268,267 + -0.3 1,268,269 + -1.1 1,268,383 - -0.4 1,268,422 + -0.1 1,268,430 - DVU1177 0.11 -0.3 1,268,447 + DVU1177 0.13 +0.1 1,268,455 - DVU1177 0.14 -0.2 1,268,455 - DVU1177 0.14 -0.1 1,268,474 - DVU1177 0.17 -1.1 1,268,498 - DVU1177 0.21 +0.2 1,268,563 + DVU1177 0.31 +0.0 1,268,587 - DVU1177 0.34 -1.0 1,268,592 - DVU1177 0.35 +0.1 1,268,639 - DVU1177 0.42 -1.6 1,268,732 - DVU1177 0.56 -1.2 1,268,752 + DVU1177 0.59 +0.0 1,268,841 - DVU1177 0.73 -0.3 1,268,846 - DVU1177 0.73 +0.1 1,268,858 - DVU1177 0.75 +0.3
Or see this region's nucleotide sequence