Experiment: MoLS4 with L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rpsB and DVU0875 are separated by 346 nucleotides DVU0875 and DVU0876 are separated by 27 nucleotides
DVU0874: rpsB - ribosomal protein S2 (TIGR), at 966,030 to 966,794
rpsB
DVU0875: DVU0875 - fumarylacetoacetate hydrolase family protein (TIGR), at 967,141 to 967,920
DVU0875
DVU0876: DVU0876 - metallo-beta-lactamase family protein (TIGR), at 967,948 to 969,612
DVU0876
Position (kb) 967
968 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 967.130 kb on - strand at 967.130 kb on - strand at 967.142 kb on + strand at 967.273 kb on + strand, within DVU0875 at 967.278 kb on + strand, within DVU0875 at 967.286 kb on - strand, within DVU0875 at 967.286 kb on - strand, within DVU0875 at 967.337 kb on + strand, within DVU0875 at 967.366 kb on - strand, within DVU0875 at 967.384 kb on + strand, within DVU0875 at 967.392 kb on - strand, within DVU0875 at 967.399 kb on - strand, within DVU0875 at 967.401 kb on + strand, within DVU0875 at 967.409 kb on - strand, within DVU0875 at 967.409 kb on - strand, within DVU0875 at 967.417 kb on + strand, within DVU0875 at 967.462 kb on + strand, within DVU0875 at 967.469 kb on + strand, within DVU0875 at 967.469 kb on + strand, within DVU0875 at 967.470 kb on - strand, within DVU0875 at 967.470 kb on - strand, within DVU0875 at 967.478 kb on + strand, within DVU0875 at 967.533 kb on - strand, within DVU0875 at 967.557 kb on - strand, within DVU0875 at 967.623 kb on + strand, within DVU0875 at 967.758 kb on - strand, within DVU0875 at 967.926 kb on + strand at 967.971 kb on + strand at 968.098 kb on - strand at 968.175 kb on + strand, within DVU0876 at 968.271 kb on - strand, within DVU0876 at 968.278 kb on - strand, within DVU0876 at 968.290 kb on + strand, within DVU0876 at 968.422 kb on + strand, within DVU0876 at 968.545 kb on - strand, within DVU0876 at 968.552 kb on - strand, within DVU0876 at 968.605 kb on + strand, within DVU0876 at 968.647 kb on + strand, within DVU0876 at 968.704 kb on - strand, within DVU0876 at 968.754 kb on + strand, within DVU0876 at 968.909 kb on - strand, within DVU0876
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine (N) remove 967,130 - +0.7 967,130 - -0.5 967,142 + -0.6 967,273 + DVU0875 0.17 -0.9 967,278 + DVU0875 0.18 -0.4 967,286 - DVU0875 0.19 -1.8 967,286 - DVU0875 0.19 +0.6 967,337 + DVU0875 0.25 -0.2 967,366 - DVU0875 0.29 -0.8 967,384 + DVU0875 0.31 -0.5 967,392 - DVU0875 0.32 -0.7 967,399 - DVU0875 0.33 -0.7 967,401 + DVU0875 0.33 +0.7 967,409 - DVU0875 0.34 -0.9 967,409 - DVU0875 0.34 -0.8 967,417 + DVU0875 0.35 -1.3 967,462 + DVU0875 0.41 -0.6 967,469 + DVU0875 0.42 +0.0 967,469 + DVU0875 0.42 -0.9 967,470 - DVU0875 0.42 -2.9 967,470 - DVU0875 0.42 -1.9 967,478 + DVU0875 0.43 -0.7 967,533 - DVU0875 0.50 -0.6 967,557 - DVU0875 0.53 -1.6 967,623 + DVU0875 0.62 -1.1 967,758 - DVU0875 0.79 -1.1 967,926 + -0.4 967,971 + -1.9 968,098 - -2.0 968,175 + DVU0876 0.14 -2.9 968,271 - DVU0876 0.19 -0.9 968,278 - DVU0876 0.20 -1.5 968,290 + DVU0876 0.21 -1.5 968,422 + DVU0876 0.28 -1.5 968,545 - DVU0876 0.36 -1.8 968,552 - DVU0876 0.36 -1.4 968,605 + DVU0876 0.39 -1.8 968,647 + DVU0876 0.42 -2.4 968,704 - DVU0876 0.45 -0.2 968,754 + DVU0876 0.48 -0.7 968,909 - DVU0876 0.58 +0.1
Or see this region's nucleotide sequence