Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5057

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
5,600,195	+				+0.0
5,600,195	+				+0.0
5,600,242	+				-1.9
5,600,335	+				-1.6
5,600,338	+				+0.0
5,600,339	-				-1.6
5,600,369	+				-1.8
5,600,539	+		Pf1N1B4_5056	0.32	+0.0
5,600,635	+		Pf1N1B4_5056	0.46	-2.2
5,600,639	+		Pf1N1B4_5056	0.46	-1.7
5,600,639	+		Pf1N1B4_5056	0.46	-1.9
5,600,640	-				-2.3
5,600,640	-		Pf1N1B4_5056	0.47	+0.0
5,600,728	+		Pf1N1B4_5056	0.59	-2.6
5,600,821	+		Pf1N1B4_5056	0.73	-1.9
5,600,821	+		Pf1N1B4_5056	0.73	+0.0
5,600,826	+				+0.0
5,600,872	+		Pf1N1B4_5056	0.80	+0.0
5,601,163	+				-2.0
5,601,164	-				+0.0
5,601,619	+		Pf1N1B4_5057	0.43	-2.6
5,601,620	-				-1.1
5,601,871	+		Pf1N1B4_5057	0.62	+0.0
5,601,872	-		Pf1N1B4_5057	0.63	-2.2
5,601,872	-		Pf1N1B4_5057	0.63	-2.8
5,602,836	+		Pf1N1B4_5058	0.35	-2.3
5,602,836	+		Pf1N1B4_5058	0.35	+0.0
5,602,837	-				-1.4
5,602,947	+		Pf1N1B4_5058	0.43	-1.1
5,602,948	-				-1.5
5,603,340	+				-1.5
5,603,341	-		Pf1N1B4_5058	0.71	+0.0
5,603,343	+		Pf1N1B4_5058	0.71	-1.1
5,603,344	-		Pf1N1B4_5058	0.71	+0.0