Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5029

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
5,574,483	+		Pf1N1B4_5027	0.49	-2.0
5,574,484	-		Pf1N1B4_5027	0.49	+0.0
5,574,789	+				+0.0
5,574,926	+		Pf1N1B4_5028	0.34	-1.3
5,574,926	+		Pf1N1B4_5028	0.34	-1.5
5,574,926	+		Pf1N1B4_5028	0.34	+0.0
5,574,926	+		Pf1N1B4_5028	0.34	+0.0
5,574,926	+		Pf1N1B4_5028	0.34	-1.5
5,574,927	-		Pf1N1B4_5028	0.34	-1.7
5,575,256	+				+0.0
5,575,256	+				-1.4
5,575,412	+				+0.0
5,575,429	-				+0.0
5,575,431	-				+0.0
5,575,431	-				+0.0
5,575,778	+		Pf1N1B4_5029	0.40	+0.0
5,575,820	+		Pf1N1B4_5029	0.45	-3.3
5,575,820	+		Pf1N1B4_5029	0.45	-2.6
5,575,820	+				+0.0
5,575,821	-		Pf1N1B4_5029	0.46	-3.1
5,576,049	-		Pf1N1B4_5029	0.76	+0.0
5,576,138	-		Pf1N1B4_5029	0.87	+0.0
5,576,177	+				+0.0
5,576,231	+				-2.1
5,576,232	-				-2.6
5,576,426	+		Pf1N1B4_5030	0.28	+0.0
5,576,427	-		Pf1N1B4_5030	0.28	-1.7
5,576,427	-		Pf1N1B4_5030	0.28	+0.0
5,576,427	-				+0.0
5,576,537	+		Pf1N1B4_5030	0.44	-4.0
5,576,730	+		Pf1N1B4_5030	0.73	+0.0
5,576,731	-		Pf1N1B4_5030	0.73	-3.3
5,576,733	+		Pf1N1B4_5030	0.73	+0.0
5,576,733	+		Pf1N1B4_5030	0.73	-1.7
5,576,734	-				-4.0
5,576,789	+		Pf1N1B4_5030	0.81	-4.3
5,576,789	+		Pf1N1B4_5030	0.81	-3.1
5,576,790	-		Pf1N1B4_5030	0.82	-3.2
5,576,790	-		Pf1N1B4_5030	0.82	-4.6
5,576,890	+				+0.0
5,576,946	-				-4.0