Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4853
Experiment: Nitrate reduction, replicate A t1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nitrate reduction, replicate A t1 |
|---|---|---|---|---|---|
| remove | |||||
| 5,362,310 | + | -2.0 | |||
| 5,362,403 | + | -1.9 | |||
| 5,362,670 | + | -1.8 | |||
| 5,362,768 | + | -2.2 | |||
| 5,362,840 | - | Pf1N1B4_4853 | 0.10 | -0.0 | |
| 5,362,871 | + | Pf1N1B4_4853 | 0.13 | -0.0 | |
| 5,362,872 | - | Pf1N1B4_4853 | 0.13 | -0.0 | |
| 5,362,872 | - | Pf1N1B4_4853 | 0.13 | -0.0 | |
| 5,362,872 | - | Pf1N1B4_4853 | 0.13 | -0.0 | |
| 5,362,948 | - | Pf1N1B4_4853 | 0.19 | -3.3 | |
| 5,363,227 | - | Pf1N1B4_4853 | 0.42 | -2.8 | |
| 5,363,576 | + | Pf1N1B4_4853 | 0.71 | -0.0 | |
| 5,363,797 | + | Pf1N1B4_4853 | 0.89 | -0.0 | |
| 5,363,968 | - | -2.3 | |||
| 5,364,054 | + | -1.7 | |||
| 5,364,212 | + | -0.0 | |||
| 5,364,294 | + | -2.2 | |||
| 5,364,417 | + | -0.0 | |||
| 5,364,448 | + | -0.0 | |||
| 5,364,448 | + | -2.9 | |||
| 5,364,448 | + | -1.0 | |||
| 5,364,467 | - | -0.0 | |||
| 5,364,771 | - | Pf1N1B4_4854 | 0.16 | -0.0 | |
| 5,364,892 | - | Pf1N1B4_4854 | 0.21 | -1.8 |
Or see this region's nucleotide sequence