Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4462

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
4,922,865	-				-0.7
4,923,258	-		Pf1N1B4_4462	0.26	+0.0
4,923,575	+		Pf1N1B4_4462	0.61	+0.0
4,923,575	+		Pf1N1B4_4462	0.61	+0.0
4,923,778	-				-0.8
4,923,784	+		Pf1N1B4_4462	0.85	-2.9
4,923,785	-		Pf1N1B4_4462	0.85	-2.1
4,924,021	+				-0.4
4,924,021	+				+0.0
4,924,021	+				+0.0
4,924,122	+				+0.0
4,924,140	-				-0.5
4,924,287	-		Pf1N1B4_4463	0.18	-1.0
4,924,309	+				-2.4
4,924,309	+		Pf1N1B4_4463	0.20	+0.0
4,924,310	-				-1.7
4,924,513	+		Pf1N1B4_4463	0.39	-1.5
4,924,513	+		Pf1N1B4_4463	0.39	+0.0
4,924,513	+		Pf1N1B4_4463	0.39	+0.0
4,924,514	-		Pf1N1B4_4463	0.39	-1.8
4,924,514	-		Pf1N1B4_4463	0.39	-3.1
4,924,756	-		Pf1N1B4_4463	0.62	-1.5