Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4403

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
4,861,824	-		Pf1N1B4_4402	0.28	-0.9
4,861,824	-		Pf1N1B4_4402	0.28	-0.8
4,861,889	+		Pf1N1B4_4402	0.36	-1.9
4,861,890	-				-1.3
4,861,922	+		Pf1N1B4_4402	0.39	-2.8
4,862,260	+		Pf1N1B4_4402	0.77	-1.4
4,862,550	+				+0.0
4,862,551	-				+0.0
4,862,551	-				-3.3
4,862,777	-		Pf1N1B4_4403	0.15	-3.0
4,862,933	-		Pf1N1B4_4403	0.27	-3.0
4,863,149	-		Pf1N1B4_4403	0.45	-2.3
4,863,487	+		Pf1N1B4_4403	0.72	+0.0
4,863,488	-		Pf1N1B4_4403	0.72	+0.0
4,863,780	-				-1.1
4,863,855	-				-2.9
4,863,858	+				+0.0
4,863,859	-				-1.9
4,863,859	-				+0.0
4,863,969	+				+0.0
4,863,970	-				-2.6
4,863,988	+				+0.0
4,863,988	+				+0.0
4,863,991	-				+0.0
4,864,125	-				-2.2
4,864,168	+				+0.0
4,864,168	+				+1.0
4,864,169	-				+0.0
4,864,170	+				+0.0
4,864,171	-				+0.0
4,864,172	+				-1.8
4,864,309	+				-2.7
4,864,491	+				-3.2
4,864,601	+				-2.1
4,864,601	+				-1.5
4,864,624	+				-3.0
4,864,625	-				+0.0
4,864,625	-				-2.4
4,864,639	+				+0.0
4,864,639	+				+0.0
4,864,643	+				-1.4
4,864,644	-				-1.3