Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4317

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
4,777,447	-				+0.1
4,777,580	-				+0.0
4,777,641	+				+0.0
4,777,872	+		Pf1N1B4_4316	0.62	+0.0
4,777,873	-		Pf1N1B4_4316	0.62	+0.0
4,778,079	-				+0.0
4,778,087	-				+0.0
4,778,134	+				-1.4
4,778,184	-				+0.0
4,778,222	+				-2.3
4,778,223	-				-2.1
4,778,296	+				-1.2
4,778,374	-				-1.4
4,778,701	+		Pf1N1B4_4317	0.34	-1.0
4,779,129	+		Pf1N1B4_4317	0.85	-3.6
4,779,129	+		Pf1N1B4_4317	0.85	-2.0
4,779,133	+				+0.0
4,779,133	+				-2.0
4,779,175	-				+0.0
4,779,175	-				-0.8
4,779,317	-				+0.0
4,779,743	-				-2.0
4,779,918	-		Pf1N1B4_4318	0.38	+0.0
4,779,924	-		Pf1N1B4_4318	0.39	-1.3
4,780,096	+		Pf1N1B4_4318	0.51	-1.8
4,780,096	+		Pf1N1B4_4318	0.51	-1.8
4,780,097	-		Pf1N1B4_4318	0.51	+0.0
4,780,226	-		Pf1N1B4_4318	0.61	-1.9