Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4230

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
4,686,596	-		Pf1N1B4_4229	0.80	+0.0
4,686,702	-		Pf1N1B4_4229	0.83	+0.0
4,686,752	-		Pf1N1B4_4229	0.85	+0.0
4,686,900	+				+0.0
4,686,900	+				-2.2
4,686,901	-				+0.0
4,687,127	+				+0.0
4,687,127	+				+0.0
4,687,128	-				-1.7
4,687,128	-				+0.0
4,687,171	+				-2.0
4,687,171	+				+0.0
4,687,172	-				+0.0
4,687,176	+				-1.7
4,687,176	+				+0.0
4,687,177	-				+0.0
4,687,312	-				-2.0
4,687,312	-				+0.0
4,687,413	+				+0.0
4,687,413	+				+0.0
4,687,413	+				+0.0
4,687,414	-				-1.0
4,687,414	-				+0.0
4,687,414	-				-2.3
4,687,414	-				-1.4
4,687,414	-				+0.0
4,687,414	-				+0.0
4,687,414	-				+0.0
4,687,484	-				-1.3
4,687,484	-				+0.0
4,687,758	+		Pf1N1B4_4230	0.19	+0.0
4,687,763	-		Pf1N1B4_4230	0.19	+0.0
4,687,763	-		Pf1N1B4_4230	0.19	+0.0
4,687,792	-		Pf1N1B4_4230	0.21	-1.9
4,687,988	+		Pf1N1B4_4230	0.29	-2.0
4,687,988	+		Pf1N1B4_4230	0.29	+0.0
4,688,544	+				+0.0
4,688,544	+		Pf1N1B4_4230	0.54	-2.3
4,688,853	+		Pf1N1B4_4230	0.68	-1.4
4,689,036	+		Pf1N1B4_4230	0.76	-1.8
4,689,121	+		Pf1N1B4_4230	0.80	-2.0
4,689,165	+		Pf1N1B4_4230	0.81	+0.0
4,689,291	+		Pf1N1B4_4230	0.87	+0.0
4,689,323	-		Pf1N1B4_4230	0.88	+0.0
4,689,439	-				-2.4
4,689,439	-				+0.0
4,689,445	-				+0.0
4,689,738	-				+0.0
4,689,739	+				+0.0
4,689,740	-				+0.0
4,689,764	-				-2.2
4,689,789	+				+0.0
4,689,842	+				-2.0
4,689,857	+				-2.3
4,689,858	-				+0.0
4,689,858	-				+0.0
4,689,860	+				+0.0
4,689,860	+				-1.7
4,689,861	-				-1.2
4,689,861	-				-2.1
4,689,870	-				+0.0
4,689,870	-				-0.7
4,689,883	-				-1.6
4,689,959	-				+0.0
4,690,076	+				+0.0
4,690,076	+				-2.2
4,690,076	+				+0.0
4,690,077	-				-0.8
4,690,077	-				+0.0
4,690,077	-				+0.0
4,690,137	+				-0.5
4,690,138	-				+0.0
4,690,138	-				-1.5
4,690,138	-				-2.3
4,690,196	+				+0.0
4,690,196	+				-1.5
4,690,196	+				+0.0
4,690,357	+				+0.0