Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3697

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
4,104,668	+		Pf1N1B4_3695	0.57	-0.0
4,104,689	-		Pf1N1B4_3695	0.61	-0.0
4,104,857	-				-1.1
4,104,972	-				-0.0
4,104,994	+				-1.8
4,104,994	+				-0.4
4,104,995	-				-1.6
4,104,995	-				-0.0
4,104,995	-				-0.0
4,104,995	-				-3.4
4,104,995	-				-0.0
4,104,995	-				-2.2
4,104,995	-				-2.1
4,104,995	-				-3.0
4,104,995	-				-3.1
4,104,995	-				-1.7
4,104,995	-				-4.1
4,104,995	-				-0.0
4,104,995	-				-0.0
4,104,995	-				-0.0
4,105,040	-		Pf1N1B4_3696	0.14	-2.0
4,105,040	-		Pf1N1B4_3696	0.14	-2.2
4,105,174	+		Pf1N1B4_3696	0.33	-2.8
4,105,174	+		Pf1N1B4_3696	0.33	-0.0
4,105,174	+		Pf1N1B4_3696	0.33	-2.1
4,105,174	+		Pf1N1B4_3696	0.33	-2.4
4,105,174	+		Pf1N1B4_3696	0.33	-0.0
4,105,174	+		Pf1N1B4_3696	0.33	-0.0
4,105,174	+		Pf1N1B4_3696	0.33	-3.0
4,105,174	+		Pf1N1B4_3696	0.33	-1.3
4,105,174	+		Pf1N1B4_3696	0.33	-0.0
4,105,174	+		Pf1N1B4_3696	0.33	-0.0
4,105,175	-		Pf1N1B4_3696	0.33	-3.3
4,105,175	-		Pf1N1B4_3696	0.33	-2.2
4,105,175	-		Pf1N1B4_3696	0.33	-1.6
4,105,175	-		Pf1N1B4_3696	0.33	-0.0
4,105,175	-		Pf1N1B4_3696	0.33	-2.1
4,105,175	-		Pf1N1B4_3696	0.33	-1.4
4,105,175	-		Pf1N1B4_3696	0.33	-1.6
4,105,175	-		Pf1N1B4_3696	0.33	-1.8
4,105,175	-		Pf1N1B4_3696	0.33	-2.3
4,105,175	-		Pf1N1B4_3696	0.33	-0.0
4,105,175	-		Pf1N1B4_3696	0.33	-2.4
4,105,175	-		Pf1N1B4_3696	0.33	-0.9
4,105,175	-		Pf1N1B4_3696	0.33	-1.9
4,105,175	-		Pf1N1B4_3696	0.33	-0.0
4,105,175	-		Pf1N1B4_3696	0.33	-1.7
4,105,175	-		Pf1N1B4_3696	0.33	-0.0
4,105,175	-		Pf1N1B4_3696	0.33	-0.4
4,105,175	-		Pf1N1B4_3696	0.33	-3.3
4,105,175	-		Pf1N1B4_3696	0.33	-1.6
4,105,175	-		Pf1N1B4_3696	0.33	-0.0
4,105,175	-		Pf1N1B4_3696	0.33	-3.9
4,105,179	-		Pf1N1B4_3696	0.34	-0.0
4,105,179	-		Pf1N1B4_3696	0.34	-2.0
4,105,207	+		Pf1N1B4_3696	0.38	-2.1
4,105,207	+		Pf1N1B4_3696	0.38	-3.9
4,105,207	+		Pf1N1B4_3696	0.38	-0.0
4,105,208	-		Pf1N1B4_3696	0.38	-2.2
4,105,208	-		Pf1N1B4_3696	0.38	-1.9
4,105,208	-		Pf1N1B4_3696	0.38	-2.4
4,105,208	-		Pf1N1B4_3696	0.38	-2.5
4,105,208	-		Pf1N1B4_3696	0.38	-0.0
4,105,258	+		Pf1N1B4_3696	0.45	-0.0
4,105,258	+		Pf1N1B4_3696	0.45	-0.0
4,105,259	-		Pf1N1B4_3696	0.45	-4.4
4,105,259	-		Pf1N1B4_3696	0.45	-2.6
4,105,259	-		Pf1N1B4_3696	0.45	-1.6
4,105,259	-		Pf1N1B4_3696	0.45	-0.0
4,105,259	-		Pf1N1B4_3696	0.45	-2.6
4,105,259	-		Pf1N1B4_3696	0.45	-2.1
4,105,268	+		Pf1N1B4_3696	0.46	-1.0
4,105,399	+		Pf1N1B4_3696	0.64	-0.0
4,105,399	+		Pf1N1B4_3696	0.64	-0.0
4,105,399	+		Pf1N1B4_3696	0.64	-0.0
4,105,567	+		Pf1N1B4_3696	0.88	-0.0
4,105,567	+		Pf1N1B4_3696	0.88	-0.0
4,105,567	+		Pf1N1B4_3696	0.88	-2.6
4,105,567	+		Pf1N1B4_3696	0.88	-0.0
4,105,568	-		Pf1N1B4_3696	0.88	-2.3
4,105,568	-		Pf1N1B4_3696	0.88	-1.8
4,105,568	-		Pf1N1B4_3696	0.88	-0.0
4,105,568	-		Pf1N1B4_3696	0.88	-1.6
4,105,652	+				-2.6
4,105,652	+				-0.0
4,105,653	-				-0.0
4,105,653	-				-0.0
4,105,653	-				-0.0
4,105,662	+				-2.0
4,105,662	+				-0.8
4,105,663	-				-0.0
4,105,663	-				-0.0
4,105,663	-				-1.9
4,105,694	+				-0.0
4,105,694	+				-0.0
4,105,694	+				-0.0
4,105,695	-				-2.3
4,105,709	+				-0.0
4,105,709	+				-0.0
4,105,709	+				-0.0
4,105,839	-		Pf1N1B4_3697	0.27	-0.0
4,105,839	-		Pf1N1B4_3697	0.27	-0.0
4,105,839	-		Pf1N1B4_3697	0.27	-0.0
4,105,841	+		Pf1N1B4_3697	0.28	-0.0
4,105,841	+		Pf1N1B4_3697	0.28	-2.7
4,105,841	+		Pf1N1B4_3697	0.28	-0.0
4,105,841	+		Pf1N1B4_3697	0.28	-2.4
4,105,842	-		Pf1N1B4_3697	0.28	-0.0
4,105,842	-		Pf1N1B4_3697	0.28	-2.8
4,105,850	+		Pf1N1B4_3697	0.29	-3.4
4,105,851	-		Pf1N1B4_3697	0.29	-0.0
4,105,947	-		Pf1N1B4_3697	0.44	-0.0
4,105,956	+		Pf1N1B4_3697	0.45	-2.6
4,105,956	+		Pf1N1B4_3697	0.45	-2.1
4,106,049	-		Pf1N1B4_3697	0.60	-0.0
4,106,049	-		Pf1N1B4_3697	0.60	-0.0
4,106,264	-				-1.9
4,106,925	-				-0.0