Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3636

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
4,042,934	-		Pf1N1B4_3634	0.54	-0.0
4,043,093	+		Pf1N1B4_3634	0.73	-0.5
4,043,093	+		Pf1N1B4_3634	0.73	-0.0
4,043,093	+		Pf1N1B4_3634	0.73	-1.4
4,043,093	+		Pf1N1B4_3634	0.73	-2.7
4,043,093	+		Pf1N1B4_3634	0.73	-1.6
4,043,098	+		Pf1N1B4_3634	0.73	-1.8
4,043,098	+		Pf1N1B4_3634	0.73	-1.5
4,043,099	-		Pf1N1B4_3634	0.73	-0.0
4,043,115	-		Pf1N1B4_3634	0.75	-0.0
4,043,330	+				-0.0
4,043,330	+				-0.0
4,043,330	+				-0.0
4,043,330	+				-2.3
4,043,330	+				-0.0
4,043,330	+				-2.0
4,043,331	-				-0.0
4,043,331	-				-0.0
4,043,331	-				-0.7
4,043,342	+				-1.7
4,043,342	+				-0.0
4,043,342	+				-0.0
4,043,342	+				-0.0
4,043,343	-				-2.6
4,043,343	-				-0.0
4,043,349	+				-1.9
4,043,349	+				-0.4
4,043,349	+				-0.0
4,043,350	-				-2.0
4,043,350	-				-0.0
4,043,426	+				-0.9
4,043,502	+		Pf1N1B4_3635	0.17	-0.0
4,043,541	+		Pf1N1B4_3635	0.25	-0.0
4,043,745	+		Pf1N1B4_3635	0.67	-0.0
4,043,900	+				-0.0
4,043,976	+		Pf1N1B4_3636	0.18	-0.0
4,043,977	-		Pf1N1B4_3636	0.18	-2.8
4,044,341	+				-0.0
4,044,341	+				-1.2
4,044,341	+				-0.0
4,044,341	+				-0.0
4,044,350	+				-0.0
4,044,350	+				-1.1
4,044,350	+				-0.0
4,044,351	-				-2.1
4,044,481	+				-1.7
4,044,552	-		Pf1N1B4_3637	0.23	+1.0
4,044,552	-		Pf1N1B4_3637	0.23	-1.1
4,044,552	-		Pf1N1B4_3637	0.23	-0.9
4,044,598	+		Pf1N1B4_3637	0.37	-2.7
4,044,599	-		Pf1N1B4_3637	0.37	-0.0
4,044,615	-		Pf1N1B4_3637	0.42	-0.0
4,044,683	-		Pf1N1B4_3637	0.62	-0.0
4,044,764	-		Pf1N1B4_3637	0.87	-0.7
4,044,957	+				-0.0