Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3609

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
4,019,231	+		Pf1N1B4_3607	0.85	-0.0
4,019,231	+		Pf1N1B4_3607	0.85	+0.6
4,019,279	+		Pf1N1B4_3607	0.89	-0.0
4,019,279	+		Pf1N1B4_3607	0.89	-1.4
4,019,280	-		Pf1N1B4_3607	0.89	-0.0
4,019,280	-		Pf1N1B4_3607	0.89	-0.4
4,019,342	+				-0.0
4,019,342	+				-0.0
4,019,342	+				-0.0
4,019,342	+				-0.0
4,019,343	-				-2.4
4,019,343	-				-1.6
4,019,343	-				-0.0
4,019,343	-				-0.9
4,019,343	-				-0.0
4,019,343	-				-2.0
4,019,343	-				-0.0
4,019,343	-				-0.0
4,019,589	-		Pf1N1B4_3608	0.34	+0.1
4,019,719	+		Pf1N1B4_3608	0.62	-0.0
4,019,720	-		Pf1N1B4_3608	0.63	-0.2
4,019,882	+				-1.5
4,019,934	-				-0.0
4,019,980	-				-0.9
4,020,066	+				-0.0
4,020,066	+				-1.0
4,020,066	+				-0.0
4,020,067	-				-3.0
4,020,067	-				-2.2
4,020,067	-				-0.0
4,020,072	+				-0.0
4,020,072	+				-0.0
4,020,072	+				-0.0
4,020,073	-				-0.0
4,020,073	-				-0.0
4,020,073	-				-0.8
4,020,073	-				-0.0
4,020,073	-				-0.0
4,020,125	+				-0.0
4,020,126	-				-0.0
4,020,126	-				-0.0
4,020,126	-				-0.0
4,020,126	-				-1.8
4,020,126	-				-1.8
4,020,205	+		Pf1N1B4_3609	0.32	-0.0
4,020,206	-		Pf1N1B4_3609	0.33	-2.6
4,020,206	-		Pf1N1B4_3609	0.33	-0.0
4,020,206	-		Pf1N1B4_3609	0.33	-2.3
4,020,262	+		Pf1N1B4_3609	0.51	-0.0
4,020,262	+		Pf1N1B4_3609	0.51	-0.0
4,020,263	-		Pf1N1B4_3609	0.51	-1.6
4,020,263	-		Pf1N1B4_3609	0.51	-0.0
4,020,263	-		Pf1N1B4_3609	0.51	-3.1
4,020,263	-		Pf1N1B4_3609	0.51	-0.0
4,020,442	+				-2.0
4,020,747	+		Pf1N1B4_3610	0.19	-0.0
4,020,748	-		Pf1N1B4_3610	0.19	-1.5
4,020,852	+		Pf1N1B4_3610	0.26	-1.9
4,020,852	+		Pf1N1B4_3610	0.26	-2.9
4,020,853	-		Pf1N1B4_3610	0.26	-0.0
4,020,853	-		Pf1N1B4_3610	0.26	-0.0
4,020,853	-		Pf1N1B4_3610	0.26	-2.3
4,020,937	-		Pf1N1B4_3610	0.31	-1.6
4,020,951	+		Pf1N1B4_3610	0.31	-1.6
4,021,084	-		Pf1N1B4_3610	0.39	-0.9
4,021,084	-		Pf1N1B4_3610	0.39	-0.0
4,021,084	-		Pf1N1B4_3610	0.39	-0.0
4,021,084	-		Pf1N1B4_3610	0.39	-0.0
4,021,084	-		Pf1N1B4_3610	0.39	-0.0
4,021,151	+		Pf1N1B4_3610	0.43	-0.0
4,021,152	-		Pf1N1B4_3610	0.43	-0.8
4,021,152	-		Pf1N1B4_3610	0.43	-0.0
4,021,152	-				-0.0
4,021,152	-		Pf1N1B4_3610	0.43	-1.3