Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3506

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
3,910,731	+		Pf1N1B4_3505	0.13	-2.1
3,910,731	+		Pf1N1B4_3505	0.13	-2.7
3,910,731	+		Pf1N1B4_3505	0.13	-3.2
3,910,731	+		Pf1N1B4_3505	0.13	-0.0
3,910,731	+		Pf1N1B4_3505	0.13	-0.0
3,910,732	-		Pf1N1B4_3505	0.14	-0.0
3,910,732	-		Pf1N1B4_3505	0.14	-0.0
3,910,732	-		Pf1N1B4_3505	0.14	-0.0
3,910,732	-		Pf1N1B4_3505	0.14	-0.0
3,910,732	-		Pf1N1B4_3505	0.14	-0.0
3,910,732	-		Pf1N1B4_3505	0.14	-3.4
3,910,732	-		Pf1N1B4_3505	0.14	-0.0
3,910,732	-		Pf1N1B4_3505	0.14	-0.0
3,910,733	+		Pf1N1B4_3505	0.14	-2.0
3,910,829	+		Pf1N1B4_3505	0.23	-1.0
3,910,863	+		Pf1N1B4_3505	0.26	-2.1
3,910,863	+		Pf1N1B4_3505	0.26	-0.0
3,910,864	-		Pf1N1B4_3505	0.26	-0.0
3,910,872	+		Pf1N1B4_3505	0.27	-1.1
3,910,872	+		Pf1N1B4_3505	0.27	-0.0
3,910,872	+		Pf1N1B4_3505	0.27	-0.0
3,910,872	+		Pf1N1B4_3505	0.27	-2.6
3,910,872	+		Pf1N1B4_3505	0.27	-1.6
3,910,873	-		Pf1N1B4_3505	0.27	-3.7
3,910,873	-		Pf1N1B4_3505	0.27	-0.4
3,910,873	-		Pf1N1B4_3505	0.27	-2.9
3,910,873	-		Pf1N1B4_3505	0.27	-1.0
3,910,950	-		Pf1N1B4_3505	0.35	-1.1
3,910,974	+		Pf1N1B4_3505	0.37	-1.0
3,910,975	-		Pf1N1B4_3505	0.37	-0.0
3,911,017	+		Pf1N1B4_3505	0.41	-0.8
3,911,017	+		Pf1N1B4_3505	0.41	-0.0
3,911,017	+		Pf1N1B4_3505	0.41	-0.0
3,911,116	+		Pf1N1B4_3505	0.51	-0.0
3,911,130	+		Pf1N1B4_3505	0.52	-0.0
3,911,130	+		Pf1N1B4_3505	0.52	-0.0
3,911,131	-		Pf1N1B4_3505	0.53	-0.0
3,911,131	-		Pf1N1B4_3505	0.53	-0.0
3,911,131	-		Pf1N1B4_3505	0.53	-0.0
3,911,318	+				-0.0
3,911,330	-				-0.0
3,911,342	+		Pf1N1B4_3505	0.73	-0.0
3,911,367	+		Pf1N1B4_3505	0.76	-0.0
3,911,388	+		Pf1N1B4_3505	0.78	-3.2
3,911,388	+		Pf1N1B4_3505	0.78	-0.0
3,911,389	-				-4.4
3,911,484	+		Pf1N1B4_3505	0.87	-0.0
3,911,554	+				-0.0
3,911,554	+				-0.0
3,911,554	+				-0.0
3,911,555	-				-0.0
3,911,580	+				-0.9
3,911,580	+				-0.0
3,911,580	+				-0.0
3,911,724	+				-0.0
3,911,724	+				-0.0
3,911,995	-		Pf1N1B4_3506	0.29	-0.0
3,912,038	+		Pf1N1B4_3506	0.34	-0.0
3,912,192	+		Pf1N1B4_3506	0.51	-4.1
3,912,192	+		Pf1N1B4_3506	0.51	-3.5
3,912,192	+		Pf1N1B4_3506	0.51	-0.0
3,912,193	-				-3.5
3,912,197	+		Pf1N1B4_3506	0.52	-0.0
3,912,197	+		Pf1N1B4_3506	0.52	-3.3
3,912,294	+		Pf1N1B4_3506	0.62	-0.0
3,912,294	+		Pf1N1B4_3506	0.62	-3.9
3,912,387	+		Pf1N1B4_3506	0.73	-0.0
3,912,387	+		Pf1N1B4_3506	0.73	-0.0
3,912,387	+		Pf1N1B4_3506	0.73	-0.0
3,912,387	+		Pf1N1B4_3506	0.73	-3.4
3,912,387	+		Pf1N1B4_3506	0.73	-0.0
3,912,388	-				-3.9
3,912,402	+		Pf1N1B4_3506	0.74	-1.4
3,912,402	+		Pf1N1B4_3506	0.74	-2.3
3,912,402	+		Pf1N1B4_3506	0.74	-4.2
3,912,403	-		Pf1N1B4_3506	0.75	-0.0
3,912,403	-		Pf1N1B4_3506	0.75	-0.0
3,912,403	-		Pf1N1B4_3506	0.75	-2.1
3,912,460	+		Pf1N1B4_3506	0.81	+1.0
3,912,460	+		Pf1N1B4_3506	0.81	-0.0
3,912,460	+		Pf1N1B4_3506	0.81	-3.3
3,912,461	-		Pf1N1B4_3506	0.81	-4.1
3,912,597	+				-2.1
3,912,597	+				-2.3
3,912,597	+				-0.0
3,912,597	+				-3.0
3,913,179	+		Pf1N1B4_3507	0.40	-3.0
3,913,179	+		Pf1N1B4_3507	0.40	-1.0
3,913,179	+		Pf1N1B4_3507	0.40	-0.0