Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_27

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
29,616	-				+0.0
29,677	+		Pf1N1B4_26	0.73	-0.7
29,677	+		Pf1N1B4_26	0.73	-2.1
29,677	+		Pf1N1B4_26	0.73	+0.0
29,678	-		Pf1N1B4_26	0.73	+0.0
29,758	+		Pf1N1B4_26	0.77	-1.8
29,759	-		Pf1N1B4_26	0.77	+0.0
29,782	+		Pf1N1B4_26	0.78	-3.9
29,918	-		Pf1N1B4_26	0.85	-0.5
29,936	-		Pf1N1B4_26	0.86	-2.1
29,944	+		Pf1N1B4_26	0.87	-1.9
29,945	-		Pf1N1B4_26	0.87	+0.0
29,957	-		Pf1N1B4_26	0.87	+0.6
29,998	+		Pf1N1B4_26	0.89	+0.0
29,999	-		Pf1N1B4_26	0.89	+0.0
29,999	-		Pf1N1B4_26	0.89	-1.8
30,198	+				-1.0
30,215	+				-1.9
30,215	+				+0.0
30,216	-				-2.0
30,216	-				-2.4
30,216	-				-2.2
30,216	-				+0.0
30,216	-				+0.0
30,216	-				+0.0
30,216	-				-1.1
30,216	-				+0.0
30,216	-				-2.0
30,219	+				-2.2
30,219	+				+0.0
30,219	+				-0.5
30,220	-				-1.0
30,220	-				-0.6
30,220	-				+0.0
30,220	-				+0.0
30,220	-				+0.0
30,220	-				+0.0
30,220	-				+0.0
30,220	-				-2.4
30,220	-				+0.0
30,355	-				+0.0
30,464	+				-1.0
30,465	-				-1.1
30,466	+				-1.4
30,467	-				+0.0
30,467	-				+0.0
30,467	-				-2.5
30,467	-				+0.0
30,469	+				+0.0
30,469	+				+0.0
30,469	+				+0.0
30,469	+				+0.0
30,469	+				-1.8
30,469	+				-1.9
30,469	+				-1.6
30,470	-				-0.7
30,494	-				+0.0
30,551	+				+0.0
30,664	+				-3.2
30,778	+		Pf1N1B4_27	0.19	+0.0
31,006	+		Pf1N1B4_27	0.38	+0.0
31,007	-				-2.1
31,405	+		Pf1N1B4_27	0.71	-3.4
31,405	+		Pf1N1B4_27	0.71	+0.0
31,405	+		Pf1N1B4_27	0.71	+0.0
31,405	+		Pf1N1B4_27	0.71	-2.4
31,406	-		Pf1N1B4_27	0.71	+0.0
31,606	+		Pf1N1B4_27	0.88	+0.0
31,631	+				+0.0
31,631	+				+0.0
31,660	+				+0.0
31,660	+				-2.9
31,660	+				-2.6
31,660	+				+0.0
31,660	+				+0.0
31,661	-				+0.0
31,661	-				+0.0
31,661	-				-2.4
31,661	-				+0.0
31,762	+				+0.0
31,781	-				+0.0
31,797	+				-1.9
31,798	-				-1.0
31,810	+				+0.0
31,892	-				+0.0
31,952	+				-2.7
31,952	+				-1.5
31,958	+				+0.0
31,958	+				-1.3
31,959	-				-3.0
31,959	-				-2.0
31,959	-				-2.0
31,959	-				-2.4
31,959	-				+0.0
32,001	+				+0.0
32,002	-				-4.0
32,144	+		Pf1N1B4_28	0.79	+0.0
32,170	+				+0.0
32,171	-				-2.2
32,171	-				+0.0
32,223	-		Pf1N1B4_29	0.18	-1.9
32,223	-		Pf1N1B4_29	0.18	-1.5
32,232	-		Pf1N1B4_29	0.22	-2.3
32,232	-		Pf1N1B4_29	0.22	+0.0
32,232	-		Pf1N1B4_29	0.22	+0.0
32,463	+				-2.4
32,517	+				+0.0
32,526	-				-2.5