Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2273

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
2,588,515	+		Pf1N1B4_2272	0.22	-2.9
2,588,530	-		Pf1N1B4_2272	0.23	-0.0
2,588,678	+		Pf1N1B4_2272	0.35	-3.3
2,588,678	+		Pf1N1B4_2272	0.35	-0.0
2,588,679	-		Pf1N1B4_2272	0.35	-0.0
2,588,679	-		Pf1N1B4_2272	0.35	-2.2
2,588,934	+		Pf1N1B4_2272	0.56	-3.5
2,588,935	-		Pf1N1B4_2272	0.56	-0.0
2,588,935	-		Pf1N1B4_2272	0.56	-0.0
2,588,935	-		Pf1N1B4_2272	0.56	-5.6
2,588,935	-				-2.0
2,588,940	+		Pf1N1B4_2272	0.57	-3.6
2,588,940	+		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,588,941	-		Pf1N1B4_2272	0.57	-0.0
2,589,363	+				-0.0
2,589,363	+				-0.0
2,589,363	+				-0.0
2,589,451	+				-3.0
2,589,479	-				-3.6
2,589,573	+		Pf1N1B4_2273	0.64	-3.1
2,589,574	-		Pf1N1B4_2273	0.65	-2.0
2,589,594	+		Pf1N1B4_2273	0.82	-3.9
2,589,599	+		Pf1N1B4_2273	0.87	-0.0
2,589,599	+		Pf1N1B4_2273	0.87	-2.9
2,589,599	+		Pf1N1B4_2273	0.87	-0.0
2,589,599	+		Pf1N1B4_2273	0.87	-2.5
2,589,599	+		Pf1N1B4_2273	0.87	-3.1
2,589,599	+		Pf1N1B4_2273	0.87	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-				-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,600	-		Pf1N1B4_2273	0.88	-1.0
2,589,600	-		Pf1N1B4_2273	0.88	-3.4
2,589,600	-		Pf1N1B4_2273	0.88	-0.0
2,589,761	+				-2.0
2,589,762	-				-1.7
2,589,766	+				-0.0
2,589,953	+		Pf1N1B4_2274	0.20	-0.8
2,589,953	+		Pf1N1B4_2274	0.20	-0.5
2,589,953	+		Pf1N1B4_2274	0.20	-2.0
2,589,954	-		Pf1N1B4_2274	0.20	-3.6
2,589,954	-		Pf1N1B4_2274	0.20	-0.0
2,589,954	-		Pf1N1B4_2274	0.20	-0.0
2,589,954	-		Pf1N1B4_2274	0.20	-0.0
2,589,954	-		Pf1N1B4_2274	0.20	-0.0
2,590,059	-		Pf1N1B4_2274	0.27	-0.0
2,590,059	-		Pf1N1B4_2274	0.27	-1.9
2,590,216	+		Pf1N1B4_2274	0.39	-1.3
2,590,473	+		Pf1N1B4_2274	0.57	-0.0
2,590,473	+		Pf1N1B4_2274	0.57	-0.0
2,590,505	+		Pf1N1B4_2274	0.59	-0.0