Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1135

Experiment: Nitrate reduction, replicate A t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t1
1,272,211	+		Pf1N1B4_1134	0.34	-0.0
1,272,556	-		Pf1N1B4_1134	0.64	-1.6
1,272,667	+		Pf1N1B4_1134	0.73	-0.0
1,272,706	+		Pf1N1B4_1134	0.77	-1.1
1,272,754	+		Pf1N1B4_1134	0.81	-1.0
1,272,755	-		Pf1N1B4_1134	0.81	-1.1
1,272,755	-		Pf1N1B4_1134	0.81	-2.4
1,272,784	+		Pf1N1B4_1134	0.83	-0.0
1,272,784	+		Pf1N1B4_1134	0.83	-0.0
1,272,797	+		Pf1N1B4_1134	0.85	-1.7
1,272,797	+		Pf1N1B4_1134	0.85	-0.0
1,272,797	+		Pf1N1B4_1134	0.85	-2.0
1,272,797	+		Pf1N1B4_1134	0.85	-0.0
1,272,797	+		Pf1N1B4_1134	0.85	-0.0
1,272,797	+		Pf1N1B4_1134	0.85	-1.0
1,272,797	+		Pf1N1B4_1134	0.85	-1.7
1,272,797	+		Pf1N1B4_1134	0.85	-0.0
1,272,797	+		Pf1N1B4_1134	0.85	-0.0
1,272,797	+		Pf1N1B4_1134	0.85	-0.8
1,272,797	+		Pf1N1B4_1134	0.85	-1.6
1,272,798	-		Pf1N1B4_1134	0.85	-0.0
1,272,798	-		Pf1N1B4_1134	0.85	-1.2
1,272,798	-		Pf1N1B4_1134	0.85	-0.0
1,272,798	-		Pf1N1B4_1134	0.85	-0.0
1,272,798	-		Pf1N1B4_1134	0.85	-2.1
1,272,798	-		Pf1N1B4_1134	0.85	-0.0
1,272,798	-		Pf1N1B4_1134	0.85	-0.0
1,272,801	+		Pf1N1B4_1134	0.85	-0.0
1,272,801	+		Pf1N1B4_1134	0.85	-0.0
1,272,801	+		Pf1N1B4_1134	0.85	-0.0
1,272,801	+		Pf1N1B4_1134	0.85	-0.0
1,272,801	+		Pf1N1B4_1134	0.85	-0.0
1,272,802	-		Pf1N1B4_1134	0.85	-0.0
1,272,820	+		Pf1N1B4_1134	0.87	-0.0
1,272,820	+		Pf1N1B4_1134	0.87	-0.0
1,272,820	+		Pf1N1B4_1134	0.87	-1.7
1,272,820	+		Pf1N1B4_1134	0.87	-0.0
1,272,821	-		Pf1N1B4_1134	0.87	-0.0
1,272,821	-		Pf1N1B4_1134	0.87	-3.4
1,272,904	+				-0.0
1,273,021	-				-1.5
1,273,021	-				-1.2
1,273,036	-				-3.9
1,273,111	-				-0.0
1,273,120	-				-0.0
1,273,151	+				-0.0
1,273,152	-				-2.1
1,273,152	-				-1.2
1,273,152	-				-1.3
1,273,152	-				-0.0
1,273,152	-				-0.0
1,273,152	-				-1.1
1,273,159	+				-4.6
1,273,159	+				-0.0
1,273,159	+				-2.2
1,273,159	+				-2.1
1,273,160	-				-0.0
1,273,160	-				-0.0
1,273,160	-				-0.0
1,273,283	-		Pf1N1B4_1135	0.84	-2.2
1,273,283	-		Pf1N1B4_1135	0.84	-0.0
1,273,283	-		Pf1N1B4_1135	0.84	-0.0
1,273,283	-		Pf1N1B4_1135	0.84	-3.1
1,273,283	-		Pf1N1B4_1135	0.84	-0.0
1,273,362	+				-2.9
1,273,362	+				-0.0
1,273,412	-				-0.0
1,273,464	-				-0.0
1,273,599	-		Pf1N1B4_1136	0.13	-0.0
1,273,599	-		Pf1N1B4_1136	0.13	-0.0
1,273,599	-		Pf1N1B4_1136	0.13	-1.2
1,273,599	-		Pf1N1B4_1136	0.13	-1.8
1,273,601	+		Pf1N1B4_1136	0.14	-0.0
1,273,602	-		Pf1N1B4_1136	0.14	-0.0
1,273,682	+		Pf1N1B4_1136	0.21	-2.6
1,273,683	-		Pf1N1B4_1136	0.21	-0.0
1,273,770	-		Pf1N1B4_1136	0.28	-2.4
1,273,776	-		Pf1N1B4_1136	0.29	-0.0
1,273,796	+		Pf1N1B4_1136	0.30	-2.2
1,273,796	+		Pf1N1B4_1136	0.30	-1.4
1,273,797	-		Pf1N1B4_1136	0.30	-0.0
1,273,859	+		Pf1N1B4_1136	0.36	-0.0
1,273,860	-				-0.0
1,274,135	+				-2.2
1,274,135	+		Pf1N1B4_1136	0.60	-0.0
1,274,135	+		Pf1N1B4_1136	0.60	-0.0
1,274,135	+		Pf1N1B4_1136	0.60	-1.0
1,274,135	+		Pf1N1B4_1136	0.60	-2.0
1,274,135	+		Pf1N1B4_1136	0.60	-0.0
1,274,136	-		Pf1N1B4_1136	0.60	-0.0
1,274,136	-		Pf1N1B4_1136	0.60	-0.0
1,274,136	-		Pf1N1B4_1136	0.60	-0.9
1,274,136	-		Pf1N1B4_1136	0.60	-0.0
1,274,136	-		Pf1N1B4_1136	0.60	-0.5
1,274,136	-		Pf1N1B4_1136	0.60	-0.8
1,274,136	-		Pf1N1B4_1136	0.60	-2.0
1,274,165	+		Pf1N1B4_1136	0.62	-0.0
1,274,166	-		Pf1N1B4_1136	0.62	-1.1
1,274,280	+		Pf1N1B4_1136	0.72	-1.8
1,274,280	+		Pf1N1B4_1136	0.72	-0.5
1,274,281	-		Pf1N1B4_1136	0.72	-0.6