Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c14020 and PGA1_c14030 are separated by 11 nucleotides PGA1_c14030 and PGA1_c14040 are separated by 246 nucleotides
PGA1_c14020: PGA1_c14020 - hypothetical protein, at 1,451,948 to 1,452,565
_c14020
PGA1_c14030: PGA1_c14030 - Uncharacterized MobA-related protein, at 1,452,577 to 1,453,203
_c14030
PGA1_c14040: PGA1_c14040 - dimethylglycine dehydrogenase DmgdH, at 1,453,450 to 1,455,867
_c14040
Position (kb)
1452
1453
1454 Strain fitness (log2 ratio)
-2
-1
0
1 at 1451.594 kb on + strand at 1451.597 kb on - strand at 1451.604 kb on - strand at 1451.686 kb on + strand at 1451.751 kb on - strand at 1451.765 kb on - strand at 1451.809 kb on + strand at 1451.811 kb on + strand at 1451.817 kb on - strand at 1451.821 kb on + strand at 1451.821 kb on + strand at 1451.824 kb on - strand at 1451.824 kb on - strand at 1451.824 kb on - strand at 1451.824 kb on - strand at 1451.824 kb on - strand at 1451.824 kb on - strand at 1451.829 kb on - strand at 1451.831 kb on + strand at 1451.840 kb on - strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.864 kb on + strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.872 kb on - strand at 1451.884 kb on - strand at 1451.903 kb on + strand at 1451.954 kb on - strand at 1451.988 kb on - strand at 1452.015 kb on + strand, within PGA1_c14020 at 1452.021 kb on - strand, within PGA1_c14020 at 1452.023 kb on - strand, within PGA1_c14020 at 1452.125 kb on + strand, within PGA1_c14020 at 1452.213 kb on + strand, within PGA1_c14020 at 1452.213 kb on + strand, within PGA1_c14020 at 1452.213 kb on + strand, within PGA1_c14020 at 1452.216 kb on - strand, within PGA1_c14020 at 1452.221 kb on - strand, within PGA1_c14020 at 1452.221 kb on - strand, within PGA1_c14020 at 1452.221 kb on - strand, within PGA1_c14020 at 1452.221 kb on - strand, within PGA1_c14020 at 1452.221 kb on - strand, within PGA1_c14020 at 1452.221 kb on - strand, within PGA1_c14020 at 1452.221 kb on - strand, within PGA1_c14020 at 1452.221 kb on - strand, within PGA1_c14020 at 1452.258 kb on + strand, within PGA1_c14020 at 1452.266 kb on - strand, within PGA1_c14020 at 1452.293 kb on + strand, within PGA1_c14020 at 1452.307 kb on + strand, within PGA1_c14020 at 1452.315 kb on - strand, within PGA1_c14020 at 1452.315 kb on - strand, within PGA1_c14020 at 1452.315 kb on - strand, within PGA1_c14020 at 1452.315 kb on - strand, within PGA1_c14020 at 1452.315 kb on - strand, within PGA1_c14020 at 1452.320 kb on - strand, within PGA1_c14020 at 1452.379 kb on - strand, within PGA1_c14020 at 1452.405 kb on - strand, within PGA1_c14020 at 1452.435 kb on + strand, within PGA1_c14020 at 1452.515 kb on - strand at 1452.515 kb on - strand at 1452.574 kb on + strand at 1452.607 kb on + strand at 1452.617 kb on + strand at 1452.617 kb on + strand at 1452.617 kb on + strand at 1452.617 kb on + strand at 1452.617 kb on + strand at 1452.617 kb on + strand at 1452.622 kb on + strand at 1452.624 kb on + strand at 1452.624 kb on + strand at 1452.744 kb on + strand, within PGA1_c14030 at 1452.836 kb on + strand, within PGA1_c14030 at 1452.972 kb on - strand, within PGA1_c14030 at 1453.061 kb on - strand, within PGA1_c14030 at 1453.104 kb on - strand, within PGA1_c14030 at 1453.163 kb on - strand at 1453.175 kb on + strand at 1453.357 kb on + strand at 1453.357 kb on + strand at 1453.357 kb on + strand at 1453.391 kb on + strand at 1453.493 kb on + strand at 1453.565 kb on + strand at 1453.643 kb on - strand at 1453.677 kb on - strand at 1453.703 kb on - strand, within PGA1_c14040 at 1453.730 kb on - strand, within PGA1_c14040 at 1453.803 kb on - strand, within PGA1_c14040 at 1453.804 kb on + strand, within PGA1_c14040 at 1453.817 kb on + strand, within PGA1_c14040 at 1453.934 kb on - strand, within PGA1_c14040 at 1453.934 kb on - strand, within PGA1_c14040 at 1453.989 kb on - strand, within PGA1_c14040 at 1454.052 kb on - strand, within PGA1_c14040 at 1454.082 kb on - strand, within PGA1_c14040 at 1454.089 kb on + strand, within PGA1_c14040 at 1454.152 kb on - strand, within PGA1_c14040
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 1,451,594 + -0.0 1,451,597 - +0.1 1,451,604 - +0.1 1,451,686 + -0.1 1,451,751 - +0.4 1,451,765 - +0.0 1,451,809 + -0.4 1,451,811 + +0.5 1,451,817 - -0.9 1,451,821 + +0.5 1,451,821 + +0.1 1,451,824 - +0.2 1,451,824 - -1.9 1,451,824 - -1.1 1,451,824 - -0.3 1,451,824 - -1.0 1,451,824 - -1.3 1,451,829 - +0.6 1,451,831 + +0.5 1,451,840 - +0.1 1,451,864 + -0.4 1,451,864 + -0.3 1,451,864 + -2.1 1,451,864 + +1.1 1,451,864 + +0.0 1,451,864 + -0.3 1,451,864 + -1.4 1,451,864 + -0.3 1,451,864 + +0.1 1,451,864 + -0.4 1,451,864 + -0.2 1,451,864 + +0.0 1,451,864 + -0.1 1,451,864 + -0.4 1,451,872 - -0.1 1,451,872 - +1.2 1,451,872 - -0.3 1,451,872 - -0.5 1,451,872 - -0.1 1,451,872 - -0.1 1,451,872 - -1.2 1,451,872 - +0.0 1,451,872 - +0.6 1,451,872 - -0.9 1,451,872 - +0.1 1,451,872 - +0.4 1,451,872 - +0.6 1,451,872 - -0.9 1,451,872 - +1.6 1,451,872 - +0.4 1,451,884 - -0.7 1,451,903 + -0.9 1,451,954 - -0.1 1,451,988 - -0.6 1,452,015 + PGA1_c14020 0.11 -1.2 1,452,021 - PGA1_c14020 0.12 +0.1 1,452,023 - PGA1_c14020 0.12 -0.5 1,452,125 + PGA1_c14020 0.29 -1.2 1,452,213 + PGA1_c14020 0.43 -0.1 1,452,213 + PGA1_c14020 0.43 -0.1 1,452,213 + PGA1_c14020 0.43 -0.5 1,452,216 - PGA1_c14020 0.43 -0.2 1,452,221 - PGA1_c14020 0.44 +0.2 1,452,221 - PGA1_c14020 0.44 -1.5 1,452,221 - PGA1_c14020 0.44 -0.9 1,452,221 - PGA1_c14020 0.44 -0.2 1,452,221 - PGA1_c14020 0.44 +0.2 1,452,221 - PGA1_c14020 0.44 +0.1 1,452,221 - PGA1_c14020 0.44 +1.5 1,452,221 - PGA1_c14020 0.44 -0.7 1,452,258 + PGA1_c14020 0.50 +0.8 1,452,266 - PGA1_c14020 0.51 -0.6 1,452,293 + PGA1_c14020 0.56 -0.8 1,452,307 + PGA1_c14020 0.58 +0.1 1,452,315 - PGA1_c14020 0.59 -0.1 1,452,315 - PGA1_c14020 0.59 +1.1 1,452,315 - PGA1_c14020 0.59 +1.3 1,452,315 - PGA1_c14020 0.59 -0.2 1,452,315 - PGA1_c14020 0.59 -1.4 1,452,320 - PGA1_c14020 0.60 +0.4 1,452,379 - PGA1_c14020 0.70 -0.2 1,452,405 - PGA1_c14020 0.74 +1.4 1,452,435 + PGA1_c14020 0.79 -0.3 1,452,515 - -1.1 1,452,515 - +0.1 1,452,574 + +0.2 1,452,607 + -0.2 1,452,617 + +1.3 1,452,617 + +0.2 1,452,617 + +0.5 1,452,617 + -0.2 1,452,617 + -0.3 1,452,617 + -0.9 1,452,622 + +0.1 1,452,624 + -0.5 1,452,624 + -0.7 1,452,744 + PGA1_c14030 0.27 +0.1 1,452,836 + PGA1_c14030 0.41 +1.5 1,452,972 - PGA1_c14030 0.63 -1.0 1,453,061 - PGA1_c14030 0.77 +0.6 1,453,104 - PGA1_c14030 0.84 -0.2 1,453,163 - -1.1 1,453,175 + -0.4 1,453,357 + -0.8 1,453,357 + -0.9 1,453,357 + +0.6 1,453,391 + +0.7 1,453,493 + +0.5 1,453,565 + -0.3 1,453,643 - -0.7 1,453,677 - +1.5 1,453,703 - PGA1_c14040 0.10 +0.5 1,453,730 - PGA1_c14040 0.12 -0.2 1,453,803 - PGA1_c14040 0.15 -0.1 1,453,804 + PGA1_c14040 0.15 -0.0 1,453,817 + PGA1_c14040 0.15 -1.2 1,453,934 - PGA1_c14040 0.20 -0.1 1,453,934 - PGA1_c14040 0.20 -0.1 1,453,989 - PGA1_c14040 0.22 +0.3 1,454,052 - PGA1_c14040 0.25 +0.4 1,454,082 - PGA1_c14040 0.26 -0.6 1,454,089 + PGA1_c14040 0.26 +1.1 1,454,152 - PGA1_c14040 0.29 -0.4
Or see this region's nucleotide sequence