Experiment: BHIS with Sulfamonomethoxine 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT3645 and BT3646 are separated by 127 nucleotides BT3646 and BT3647 are separated by 152 nucleotides BT3647 and BT3648 are separated by 18 nucleotides
BT3645: BT3645 - two-component system sensor histidine kinase (NCBI ptt file), at 4,722,402 to 4,724,417
BT3645
BT3646: BT3646 - dihydropteroate synthase (NCBI ptt file), at 4,724,545 to 4,725,408
BT3646
BT3647: BT3647 - conserved hypothetical protein (NCBI ptt file), at 4,725,561 to 4,726,247
BT3647
BT3648: BT3648 - putative modulator of DNA gyrase (NCBI ptt file), at 4,726,266 to 4,727,807
BT3648
Position (kb)
4724
4725
4726 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4723.688 kb on - strand, within BT3645 at 4723.690 kb on + strand, within BT3645 at 4723.695 kb on + strand, within BT3645 at 4723.696 kb on - strand, within BT3645 at 4723.699 kb on + strand, within BT3645 at 4723.700 kb on - strand, within BT3645 at 4723.700 kb on - strand, within BT3645 at 4723.700 kb on - strand, within BT3645 at 4723.721 kb on + strand, within BT3645 at 4723.823 kb on + strand, within BT3645 at 4723.824 kb on - strand, within BT3645 at 4723.824 kb on - strand, within BT3645 at 4723.845 kb on + strand, within BT3645 at 4723.948 kb on + strand, within BT3645 at 4724.008 kb on + strand, within BT3645 at 4724.046 kb on + strand, within BT3645 at 4724.047 kb on - strand, within BT3645 at 4724.047 kb on - strand, within BT3645 at 4724.120 kb on + strand, within BT3645 at 4724.167 kb on + strand, within BT3645 at 4724.167 kb on + strand, within BT3645 at 4724.171 kb on - strand, within BT3645 at 4724.193 kb on + strand, within BT3645 at 4724.325 kb on - strand at 4724.449 kb on + strand at 4724.465 kb on - strand at 4724.484 kb on - strand at 4724.534 kb on + strand at 4725.455 kb on + strand at 4725.455 kb on + strand at 4725.468 kb on + strand at 4726.298 kb on + strand at 4726.298 kb on + strand at 4726.299 kb on - strand at 4726.300 kb on + strand at 4726.301 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Sulfamonomethoxine 0.2 mM remove 4,723,688 - BT3645 0.64 -1.3 4,723,690 + BT3645 0.64 +1.3 4,723,695 + BT3645 0.64 -0.5 4,723,696 - BT3645 0.64 -2.3 4,723,699 + BT3645 0.64 -1.5 4,723,700 - BT3645 0.64 -0.9 4,723,700 - BT3645 0.64 -0.9 4,723,700 - BT3645 0.64 -1.3 4,723,721 + BT3645 0.65 -1.2 4,723,823 + BT3645 0.70 -2.3 4,723,824 - BT3645 0.71 -1.5 4,723,824 - BT3645 0.71 +1.4 4,723,845 + BT3645 0.72 -1.4 4,723,948 + BT3645 0.77 -1.5 4,724,008 + BT3645 0.80 +0.1 4,724,046 + BT3645 0.82 -1.9 4,724,047 - BT3645 0.82 -0.9 4,724,047 - BT3645 0.82 -2.3 4,724,120 + BT3645 0.85 -1.9 4,724,167 + BT3645 0.88 +0.1 4,724,167 + BT3645 0.88 -1.6 4,724,171 - BT3645 0.88 -2.3 4,724,193 + BT3645 0.89 -2.5 4,724,325 - +0.3 4,724,449 + -2.5 4,724,465 - -1.2 4,724,484 - -2.9 4,724,534 + -1.5 4,725,455 + -3.6 4,725,455 + -0.7 4,725,468 + -2.3 4,726,298 + -0.9 4,726,298 + +1.1 4,726,299 - +0.6 4,726,300 + +1.4 4,726,301 - -0.5
Or see this region's nucleotide sequence