Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2252

Experiment: BHIS with Sulfamonomethoxine 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Sulfamonomethoxine 0.2 mM
2,820,606	+		BT2251	0.11	-2.0
2,820,661	-		BT2251	0.16	-0.4
2,820,661	-		BT2251	0.16	-0.9
2,820,692	-		BT2251	0.19	-1.5
2,820,756	+		BT2251	0.24	-1.9
2,820,757	-		BT2251	0.25	+0.1
2,820,757	-		BT2251	0.25	-0.9
2,820,862	-		BT2251	0.34	-1.7
2,820,867	+		BT2251	0.35	-0.9
2,820,905	-		BT2251	0.38	+1.1
2,820,923	-		BT2251	0.40	-1.4
2,820,933	-		BT2251	0.41	-1.5
2,820,943	-		BT2251	0.42	-2.3
2,820,975	+		BT2251	0.45	-0.2
2,820,975	+		BT2251	0.45	-2.3
2,820,976	-		BT2251	0.45	-2.3
2,821,082	-		BT2251	0.55	-0.9
2,821,082	-		BT2251	0.55	-0.5
2,821,082	-		BT2251	0.55	-2.1
2,821,165	+		BT2251	0.62	+0.2
2,821,165	+		BT2251	0.62	-2.3
2,821,219	-		BT2251	0.67	+0.1
2,821,227	+		BT2251	0.68	+0.1
2,821,227	+		BT2251	0.68	-1.7
2,821,228	-		BT2251	0.68	-1.9
2,821,228	-		BT2251	0.68	-1.6
2,821,299	+		BT2251	0.75	-0.8
2,821,315	+		BT2251	0.76	-0.9
2,821,316	-		BT2251	0.76	+1.2
2,821,376	-		BT2251	0.82	+0.1
2,821,498	-				+1.4
2,821,504	+				-0.9
2,821,514	-				+1.1
2,821,514	-				-1.9
2,821,514	-				-1.9
2,821,553	-				-0.8
2,821,565	-				-1.0
2,821,572	-				-0.9
2,821,575	-				-2.5
2,821,589	-				-1.5
2,821,594	+				+1.4
2,821,594	+				-1.5
2,821,596	+				-0.5
2,821,597	-				-1.6
2,821,605	+				-1.2
2,821,609	+				-1.7
2,821,611	+				+0.3
2,821,626	+				-1.4
2,821,630	+				-0.4
2,821,648	+				-0.9
2,821,828	-				-1.3
2,821,867	-				+0.8
2,822,000	-		BT2252	0.14	-1.6
2,822,046	+		BT2252	0.15	-2.5
2,822,046	+		BT2252	0.15	-2.3
2,822,100	+		BT2252	0.17	-0.8
2,822,104	+		BT2252	0.17	-1.6
2,822,105	-				-0.9
2,822,208	+		BT2252	0.20	-0.5
2,822,239	+		BT2252	0.21	-0.2
2,822,242	+		BT2252	0.22	-0.5
2,822,242	+		BT2252	0.22	-1.9
2,822,242	+		BT2252	0.22	-2.5
2,822,275	+		BT2252	0.23	-1.6
2,822,286	+		BT2252	0.23	-1.7
2,822,311	+		BT2252	0.24	-0.9
2,822,399	+		BT2252	0.27	-1.7
2,822,427	+		BT2252	0.28	+0.1
2,822,427	+		BT2252	0.28	-2.3
2,822,428	-		BT2252	0.28	-1.9
2,822,428	-		BT2252	0.28	-0.5
2,822,440	+		BT2252	0.28	-4.9
2,822,534	+		BT2252	0.31	+0.1
2,822,534	+		BT2252	0.31	-3.3
2,822,534	+		BT2252	0.31	-1.5
2,822,536	+		BT2252	0.31	-1.5
2,822,536	+		BT2252	0.31	-1.1
2,822,536	+		BT2252	0.31	+1.9
2,822,537	-		BT2252	0.31	+1.6
2,822,555	-		BT2252	0.32	-0.6
2,822,575	+		BT2252	0.33	-0.9
2,822,576	-		BT2252	0.33	+0.9
2,822,598	+		BT2252	0.33	-2.1
2,822,598	+		BT2252	0.33	-2.3
2,822,599	-		BT2252	0.33	-1.8
2,822,600	+		BT2252	0.33	-2.2
2,822,600	+		BT2252	0.33	-1.5
2,822,601	-		BT2252	0.33	-1.4
2,822,601	-		BT2252	0.33	-2.5
2,822,601	-		BT2252	0.33	-0.5
2,822,601	-		BT2252	0.33	-0.9
2,822,679	+		BT2252	0.36	+0.3
2,822,742	+		BT2252	0.38	+0.1
2,822,816	+		BT2252	0.40	+0.8
2,822,816	+		BT2252	0.40	-1.8
2,822,816	+		BT2252	0.40	+0.6
2,822,817	-		BT2252	0.40	-2.4
2,822,817	-		BT2252	0.40	-0.5
2,822,817	-		BT2252	0.40	+0.1
2,822,859	+		BT2252	0.42	-3.1
2,822,920	-		BT2252	0.44	-1.9
2,823,084	-		BT2252	0.49	-1.9
2,823,187	-		BT2252	0.53	-1.8
2,823,221	-		BT2252	0.54	-0.5
2,823,265	+		BT2252	0.55	-3.9
2,823,296	+		BT2252	0.56	-1.9
2,823,296	+		BT2252	0.56	-0.9
2,823,297	-		BT2252	0.56	-1.4
2,823,297	-		BT2252	0.56	-2.3
2,823,303	-		BT2252	0.57	-1.3
2,823,303	-		BT2252	0.57	-0.5
2,823,317	-		BT2252	0.57	-2.3
2,823,346	+		BT2252	0.58	-1.1
2,823,352	-		BT2252	0.58	-0.9
2,823,382	-		BT2252	0.59	-1.9
2,823,402	+		BT2252	0.60	-0.8
2,823,438	-		BT2252	0.61	-0.9
2,823,465	+		BT2252	0.62	-0.9
2,823,507	+		BT2252	0.63	+1.1
2,823,545	-		BT2252	0.64	-2.3
2,823,557	+		BT2252	0.65	+1.4
2,823,561	+		BT2252	0.65	-1.9
2,823,561	+		BT2252	0.65	+1.1
2,823,572	-		BT2252	0.65	-2.6
2,823,598	-		BT2252	0.66	-0.8
2,823,621	+		BT2252	0.67	+1.3
2,823,621	+		BT2252	0.67	-0.9
2,823,654	+		BT2252	0.68	-2.4
2,823,788	+		BT2252	0.73	+0.1
2,823,788	+		BT2252	0.73	-2.5
2,823,788	+		BT2252	0.73	-0.9
2,823,789	-		BT2252	0.73	-0.8
2,823,865	+		BT2252	0.75	-1.9
2,823,866	-		BT2252	0.75	-1.9
2,823,869	+		BT2252	0.75	-2.9
2,823,870	-		BT2252	0.75	-0.9
2,823,870	-		BT2252	0.75	+1.4
2,823,870	-		BT2252	0.75	+1.4
2,823,870	-		BT2252	0.75	-2.1
2,823,893	-		BT2252	0.76	+0.1
2,823,893	-		BT2252	0.76	+1.1
2,823,957	-		BT2252	0.78	+0.1
2,823,969	+		BT2252	0.78	-1.2
2,824,036	+		BT2252	0.81	-0.4
2,824,135	+		BT2252	0.84	-0.9
2,824,136	-		BT2252	0.84	+0.4
2,824,157	+		BT2252	0.85	-1.1
2,824,158	-		BT2252	0.85	+0.5
2,824,158	-		BT2252	0.85	-3.3
2,824,204	+		BT2252	0.86	-1.2
2,824,265	-		BT2252	0.88	-1.9
2,824,450	-				-2.4
2,824,522	-				+1.6
2,824,522	-				-0.5
2,824,522	-				-3.0
2,824,531	+				+1.1
2,824,553	-				-2.9
2,824,559	+				-1.3
2,824,560	-				+0.1
2,824,560	-				-1.9
2,824,561	+				-1.4
2,824,562	-				-2.5
2,824,562	-				-0.7
2,824,585	+				+0.6
2,824,586	-				-1.2
2,824,608	+				+2.1
2,824,652	+				-3.4
2,824,654	+				-0.4
2,824,654	+				-1.2
2,824,655	-				+0.2
2,824,656	+				+0.1
2,824,657	-				+1.1
2,824,659	-				-1.9
2,824,679	+				-2.8
2,824,938	+		BT2253	0.24	-1.5
2,824,992	+		BT2253	0.28	-1.5
2,824,996	+		BT2253	0.28	-0.8
2,824,997	-		BT2253	0.28	+1.1
2,825,129	-		BT2253	0.38	-1.1
2,825,162	+		BT2253	0.40	-2.3
2,825,249	-		BT2253	0.47	-1.5
2,825,292	+		BT2253	0.50	-1.5
2,825,357	+		BT2253	0.55	-1.8
2,825,357	+		BT2253	0.55	+0.1
2,825,357	+		BT2253	0.55	+0.2
2,825,370	-		BT2253	0.56	+0.1
2,825,394	+		BT2253	0.58	+0.1
2,825,394	+		BT2253	0.58	-0.7
2,825,395	-		BT2253	0.58	-0.0
2,825,399	+		BT2253	0.58	-1.8
2,825,441	+		BT2253	0.61	+1.5
2,825,482	+		BT2253	0.64	-0.9
2,825,483	-		BT2253	0.64	-2.5
2,825,516	-				-2.5
2,825,517	+		BT2253	0.67	-0.5
2,825,517	+		BT2253	0.67	-0.9
2,825,518	-		BT2253	0.67	-2.0
2,825,527	-		BT2253	0.67	-0.8
2,825,530	+		BT2253	0.68	+0.1
2,825,596	-		BT2253	0.73	-1.4
2,825,599	-		BT2253	0.73	+0.8