Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0756

Experiment: BHIS with Sulfamonomethoxine 0.2 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT0755 and BT0756 are separated by 127 nucleotidesBT0756 and BT0757 are separated by 1 nucleotides BT0755: BT0755 - hypothetical protein (NCBI ptt file), at 939,715 to 941,520 BT0755 BT0756: BT0756 - iduronate 2-sulfatase precursor (NCBI ptt file), at 941,648 to 943,042 BT0756 BT0757: BT0757 - beta-galactosidase (NCBI ptt file), at 943,044 to 945,092 BT0757 Position (kb) 941 942 943 944Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 940.659 kb on + strand, within BT0755at 940.739 kb on + strand, within BT0755at 940.740 kb on - strand, within BT0755at 940.750 kb on + strand, within BT0755at 940.753 kb on - strand, within BT0755at 940.758 kb on - strand, within BT0755at 940.796 kb on - strand, within BT0755at 940.839 kb on + strand, within BT0755at 940.840 kb on - strand, within BT0755at 940.986 kb on + strand, within BT0755at 940.987 kb on - strand, within BT0755at 940.987 kb on - strand, within BT0755at 940.998 kb on - strand, within BT0755at 941.002 kb on - strand, within BT0755at 941.154 kb on - strand, within BT0755at 941.235 kb on - strand, within BT0755at 941.311 kb on + strand, within BT0755at 941.337 kb on - strand, within BT0755at 941.338 kb on + strand, within BT0755at 941.338 kb on + strand, within BT0755at 941.407 kb on + strandat 941.444 kb on - strandat 941.444 kb on - strandat 941.444 kb on - strandat 941.647 kb on + strandat 941.819 kb on + strand, within BT0756at 942.087 kb on - strand, within BT0756at 942.412 kb on - strand, within BT0756at 942.420 kb on - strand, within BT0756at 942.420 kb on - strand, within BT0756at 942.640 kb on + strand, within BT0756at 942.641 kb on - strand, within BT0756at 942.725 kb on - strand, within BT0756at 942.985 kb on + strandat 943.058 kb on + strandat 943.196 kb on - strandat 943.257 kb on - strand, within BT0757at 943.364 kb on + strand, within BT0757at 943.458 kb on - strand, within BT0757at 943.476 kb on - strand, within BT0757at 943.476 kb on - strand, within BT0757at 943.524 kb on + strand, within BT0757at 943.575 kb on - strand, within BT0757at 943.623 kb on - strand, within BT0757at 943.679 kb on + strand, within BT0757at 943.680 kb on - strand, within BT0757at 943.757 kb on + strand, within BT0757at 943.758 kb on - strand, within BT0757at 943.760 kb on - strand, within BT0757at 944.024 kb on - strand, within BT0757

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Per-strain Table

Position Strand Gene LocusTag Fraction BHIS with Sulfamonomethoxine 0.2 mM
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940,659 + BT0755 0.52 -0.6
940,739 + BT0755 0.57 -1.2
940,740 - BT0755 0.57 -2.1
940,750 + BT0755 0.57 -0.2
940,753 - BT0755 0.57 -1.8
940,758 - BT0755 0.58 -1.1
940,796 - BT0755 0.60 +0.8
940,839 + BT0755 0.62 -1.8
940,840 - BT0755 0.62 -1.2
940,986 + BT0755 0.70 -0.6
940,987 - BT0755 0.70 -1.2
940,987 - BT0755 0.70 -0.2
940,998 - BT0755 0.71 +0.8
941,002 - BT0755 0.71 -2.8
941,154 - BT0755 0.80 -0.2
941,235 - BT0755 0.84 -2.2
941,311 + BT0755 0.88 -1.2
941,337 - BT0755 0.90 -2.6
941,338 + BT0755 0.90 -3.2
941,338 + BT0755 0.90 -2.2
941,407 + +0.8
941,444 - -2.2
941,444 - -1.5
941,444 - -1.2
941,647 + -0.9
941,819 + BT0756 0.12 +2.1
942,087 - BT0756 0.31 +2.1
942,412 - BT0756 0.55 -1.2
942,420 - BT0756 0.55 +1.4
942,420 - BT0756 0.55 -0.8
942,640 + BT0756 0.71 +0.8
942,641 - BT0756 0.71 +1.1
942,725 - BT0756 0.77 +0.8
942,985 + -1.8
943,058 + -2.2
943,196 - -1.8
943,257 - BT0757 0.10 +0.8
943,364 + BT0757 0.16 -1.2
943,458 - BT0757 0.20 -1.8
943,476 - BT0757 0.21 -1.5
943,476 - BT0757 0.21 -1.2
943,524 + BT0757 0.23 -2.4
943,575 - BT0757 0.26 -1.7
943,623 - BT0757 0.28 -1.8
943,679 + BT0757 0.31 -2.5
943,680 - BT0757 0.31 -3.5
943,757 + BT0757 0.35 -2.5
943,758 - BT0757 0.35 -1.5
943,760 - BT0757 0.35 -0.8
944,024 - BT0757 0.48 -0.2

Or see this region's nucleotide sequence