Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_800

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
911,862	+		Pf1N1B4_798	0.22	-0.1
911,862	+		Pf1N1B4_798	0.22	-0.1
911,862	+		Pf1N1B4_798	0.22	-0.1
911,862	+				-2.4
911,862	+		Pf1N1B4_798	0.22	-3.4
911,863	-		Pf1N1B4_798	0.22	-0.1
911,863	-		Pf1N1B4_798	0.22	-0.1
911,863	-		Pf1N1B4_798	0.22	-0.1
911,907	+		Pf1N1B4_798	0.27	-2.4
911,907	+		Pf1N1B4_798	0.27	-0.1
911,908	-		Pf1N1B4_798	0.27	-3.8
911,944	+		Pf1N1B4_798	0.30	-0.1
911,945	-		Pf1N1B4_798	0.31	-4.0
912,021	+		Pf1N1B4_798	0.39	-0.1
912,022	-		Pf1N1B4_798	0.39	-0.1
912,186	+		Pf1N1B4_798	0.56	-2.7
912,186	+		Pf1N1B4_798	0.56	-0.1
912,186	+		Pf1N1B4_798	0.56	-0.1
912,187	-		Pf1N1B4_798	0.56	-0.1
912,187	-		Pf1N1B4_798	0.56	-0.1
912,187	-		Pf1N1B4_798	0.56	-0.1
912,216	+		Pf1N1B4_798	0.59	-0.1
912,217	-		Pf1N1B4_798	0.59	-0.1
912,417	-		Pf1N1B4_798	0.81	-0.1
912,625	+				-0.1
912,625	+				-2.5
912,625	+				-0.4
912,625	+				-2.8
912,625	+				-0.3
912,625	+				-0.1
912,625	+				-1.7
912,625	+				-0.1
912,626	-				-2.8
912,626	-				-2.1
912,626	-				-1.2
912,626	-				-0.1
912,626	-				-0.1
912,626	-				-2.1
912,626	-				-1.5
912,711	+				-2.8
912,714	-		Pf1N1B4_799	0.42	-0.1
912,736	+		Pf1N1B4_799	0.56	-0.1
912,736	+		Pf1N1B4_799	0.56	-0.1
912,792	+				-0.1
912,928	-				-2.0
913,066	+		Pf1N1B4_800	0.22	-0.1
913,066	+		Pf1N1B4_800	0.22	-3.2
913,066	+		Pf1N1B4_800	0.22	-0.1
913,066	+		Pf1N1B4_800	0.22	-0.1
913,066	+		Pf1N1B4_800	0.22	-0.1
913,066	+		Pf1N1B4_800	0.22	-0.1
913,066	+		Pf1N1B4_800	0.22	+0.4
913,066	+		Pf1N1B4_800	0.22	-0.1
913,067	-		Pf1N1B4_800	0.22	-0.1
913,067	-		Pf1N1B4_800	0.22	-3.3
913,067	-		Pf1N1B4_800	0.22	-0.1
913,067	-		Pf1N1B4_800	0.22	-2.9
913,077	+		Pf1N1B4_800	0.23	-0.1
913,078	-		Pf1N1B4_800	0.23	-0.1
913,078	-		Pf1N1B4_800	0.23	-0.1
913,168	+		Pf1N1B4_800	0.31	-3.5
913,168	+		Pf1N1B4_800	0.31	-3.3
913,254	+		Pf1N1B4_800	0.39	-0.1
913,254	+		Pf1N1B4_800	0.39	-0.1
913,255	-		Pf1N1B4_800	0.39	-0.1
913,312	+		Pf1N1B4_800	0.44	-0.1
913,312	+		Pf1N1B4_800	0.44	-2.7
913,312	+		Pf1N1B4_800	0.44	-0.1
913,312	+		Pf1N1B4_800	0.44	-0.1
913,313	-		Pf1N1B4_800	0.44	-0.1
913,339	+		Pf1N1B4_800	0.46	-3.2
913,339	+		Pf1N1B4_800	0.46	-0.1
913,339	+		Pf1N1B4_800	0.46	-0.1
913,339	+		Pf1N1B4_800	0.46	-0.1
913,339	+				-1.7
913,429	-		Pf1N1B4_800	0.54	-3.5
913,429	-		Pf1N1B4_800	0.54	-0.1
913,525	+		Pf1N1B4_800	0.63	-0.1
913,526	-		Pf1N1B4_800	0.63	-0.1
913,675	+		Pf1N1B4_800	0.76	-0.1
913,676	-		Pf1N1B4_800	0.76	-0.1
913,676	-		Pf1N1B4_800	0.76	-0.1
913,923	+				-2.5
913,923	+				-0.1
913,923	+				-0.1
913,923	+				-0.1
913,924	-				-4.1
913,924	-				-0.1
913,942	+				-0.1
913,942	+				-1.7
913,942	+				-2.5
913,943	-				-0.1
913,966	-				-4.3
914,000	+				-0.1
914,001	-				-2.6
914,001	-				-3.7
914,001	-				-0.1
914,058	-				-0.1
914,099	+				-2.5
914,099	+				-1.1
914,100	-				-1.6
914,100	-				-2.3
914,100	-				-0.1
914,127	-				-0.1
914,127	-				-3.6
914,127	-				-0.9
914,171	+		Pf1N1B4_801	0.12	-3.0
914,202	-				-0.1
914,339	+		Pf1N1B4_801	0.24	-0.1
914,339	+		Pf1N1B4_801	0.24	-0.1
914,339	+		Pf1N1B4_801	0.24	-0.1
914,339	+		Pf1N1B4_801	0.24	-0.1
914,339	+				-0.1
914,339	+		Pf1N1B4_801	0.24	-2.5
914,340	-		Pf1N1B4_801	0.24	-0.1
914,343	+		Pf1N1B4_801	0.24	-0.1
914,344	-		Pf1N1B4_801	0.24	-0.1
914,344	-		Pf1N1B4_801	0.24	-0.1
914,344	-		Pf1N1B4_801	0.24	-0.1
914,459	+		Pf1N1B4_801	0.32	-0.1
914,616	-		Pf1N1B4_801	0.43	-0.1
914,649	-		Pf1N1B4_801	0.46	-0.1
914,649	-		Pf1N1B4_801	0.46	-4.8
914,649	-		Pf1N1B4_801	0.46	-0.1