Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_786

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
895,606	+		Pf1N1B4_784	0.81	-0.1
895,606	+		Pf1N1B4_784	0.81	-2.6
895,606	+				-3.5
895,606	+		Pf1N1B4_784	0.81	-0.1
895,606	+		Pf1N1B4_784	0.81	-3.2
895,606	+		Pf1N1B4_784	0.81	-0.1
895,606	+		Pf1N1B4_784	0.81	-2.8
895,607	-		Pf1N1B4_784	0.81	-3.2
895,607	-		Pf1N1B4_784	0.81	-0.1
895,607	-		Pf1N1B4_784	0.81	-0.1
895,607	-		Pf1N1B4_784	0.81	-0.1
895,607	-		Pf1N1B4_784	0.81	-2.1
895,607	-				-0.1
895,607	-		Pf1N1B4_784	0.81	-2.2
895,607	-		Pf1N1B4_784	0.81	-0.1
895,607	-				-0.1
895,621	+		Pf1N1B4_784	0.83	-0.7
895,621	+		Pf1N1B4_784	0.83	-0.1
895,622	-		Pf1N1B4_784	0.83	-0.1
895,670	-		Pf1N1B4_784	0.88	-0.1
895,705	+				-0.1
895,706	-				-2.6
895,854	+				-0.1
895,854	+				-0.1
895,854	+				-0.1
895,855	-				-0.1
895,863	+				-0.1
895,863	+				-3.1
895,863	+				-0.1
895,863	+				-2.2
895,863	+				-0.7
895,863	+				-0.1
895,863	+				-0.1
895,863	+				-1.8
895,863	+				-0.1
895,864	-				-2.5
895,961	+				-0.1
895,961	+				-0.1
895,962	-				-0.1
896,114	+		Pf1N1B4_785	0.10	-1.8
896,115	-		Pf1N1B4_785	0.10	-0.1
896,178	-		Pf1N1B4_785	0.22	-0.1
896,178	-		Pf1N1B4_785	0.22	-0.1
896,316	-		Pf1N1B4_785	0.49	-0.1
896,316	-		Pf1N1B4_785	0.49	-0.1
896,316	-		Pf1N1B4_785	0.49	-0.1
896,416	+		Pf1N1B4_785	0.69	-1.7
896,417	-		Pf1N1B4_785	0.69	-0.1
896,417	-		Pf1N1B4_785	0.69	-1.9
896,417	-		Pf1N1B4_785	0.69	-3.1
896,646	+		Pf1N1B4_786	0.10	-3.4
896,647	-		Pf1N1B4_786	0.11	-3.5
896,647	-		Pf1N1B4_786	0.11	-0.1
896,970	+				-0.1
897,063	-		Pf1N1B4_786	0.76	-0.1
897,063	-		Pf1N1B4_786	0.76	-2.8
897,138	+		Pf1N1B4_786	0.87	-0.1
897,138	+		Pf1N1B4_786	0.87	-0.1
897,138	+		Pf1N1B4_786	0.87	-0.1
897,139	-		Pf1N1B4_786	0.88	-0.1
897,139	-		Pf1N1B4_786	0.88	-2.8
897,139	-		Pf1N1B4_786	0.88	-0.1
897,164	+				-0.1
897,281	-				-3.2
897,281	-				-2.1
897,409	+				-0.1
897,410	-		Pf1N1B4_787	0.39	-3.3
897,410	-		Pf1N1B4_787	0.39	-0.1
897,746	+				-0.1
897,747	-				-0.1
897,765	-				-0.1
897,798	+				-2.6
897,812	-				-1.7
897,822	-				-0.1
897,823	+				-0.1
897,824	-				-0.1
897,824	-				-0.1
897,824	-				-0.1
897,824	-				-3.0
897,824	-				-0.1
897,884	+				-0.1
897,884	+				-0.4
897,884	+				-3.0
897,884	+				-3.5
897,885	-				-0.1
897,885	-				-0.1
897,885	-				-0.1
897,885	-				-0.1
897,934	+				-0.1
897,934	+				-0.1
897,934	+				-0.1
897,935	-				-2.5
897,935	-				-2.7
897,935	-				-3.9
897,935	-				-1.9
897,935	-				-1.9
897,935	-				-0.1
897,935	-				-1.6
897,942	-				-0.1
897,942	-				-0.1
897,942	-				-0.1
898,130	+		Pf1N1B4_788	0.18	-0.1
898,130	+		Pf1N1B4_788	0.18	-2.2
898,130	+		Pf1N1B4_788	0.18	-0.1
898,131	-		Pf1N1B4_788	0.18	-0.1
898,131	-		Pf1N1B4_788	0.18	-0.1
898,131	-		Pf1N1B4_788	0.18	-0.1
898,176	-		Pf1N1B4_788	0.22	-2.9
898,191	-		Pf1N1B4_788	0.23	-0.1
898,202	+		Pf1N1B4_788	0.23	-0.1
898,202	+		Pf1N1B4_788	0.23	-0.1
898,202	+		Pf1N1B4_788	0.23	-0.1
898,202	+		Pf1N1B4_788	0.23	-0.1
898,202	+		Pf1N1B4_788	0.23	-0.1
898,202	+				-0.1
898,203	-		Pf1N1B4_788	0.24	-0.1
898,203	-		Pf1N1B4_788	0.24	-0.1
898,203	-		Pf1N1B4_788	0.24	-0.1