Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5829
Experiment: Nitrate reduction, replicate C t1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nitrate reduction, replicate C t1 |
---|---|---|---|---|---|
remove | |||||
263,507 | + | -1.0 | |||
263,511 | + | -2.4 | |||
263,515 | + | +0.1 | |||
263,515 | + | -3.2 | |||
263,920 | - | Pf1N1B4_5829 | 0.39 | -3.6 | |
264,037 | - | Pf1N1B4_5829 | 0.54 | -2.8 | |
264,498 | + | Pf1N1B4_5830 | 0.15 | -2.2 | |
264,499 | - | Pf1N1B4_5830 | 0.15 | -2.1 | |
264,672 | + | Pf1N1B4_5830 | 0.37 | +0.1 | |
264,771 | + | Pf1N1B4_5830 | 0.50 | +0.1 | |
264,883 | - | Pf1N1B4_5830 | 0.65 | -1.5 | |
264,906 | + | -0.9 | |||
264,924 | + | Pf1N1B4_5830 | 0.70 | -3.3 | |
264,925 | - | Pf1N1B4_5830 | 0.70 | +0.1 | |
265,359 | - | +0.1 | |||
265,359 | - | +0.1 | |||
265,378 | - | +0.1 |
Or see this region's nucleotide sequence