Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5293

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
48,904	+				-3.3
48,904	+				-0.0
48,904	+				-2.6
48,904	+				-0.0
48,904	+				-0.0
48,905	-				-0.0
49,005	+				-2.7
49,005	+				-0.0
49,005	+				-3.3
49,005	+				-0.0
49,005	+				-0.0
49,006	-				-0.0
49,006	-				-3.2
49,006	-				-0.0
49,183	-				-4.2
49,231	+				-0.0
49,231	+				-0.0
49,231	+				-2.4
49,231	+				-0.0
49,231	+				-4.1
49,231	+				-0.0
49,231	+				-0.0
49,231	+				-0.0
49,231	+				-0.0
49,231	+				-0.0
49,231	+				-0.0
49,231	+				-0.0
49,232	-				-1.4
49,232	-				-2.2
49,232	-				-2.6
49,232	-				-0.0
49,232	-				-2.0
49,232	-				-1.6
49,235	+				-0.0
49,235	+				-1.5
49,235	+				-0.0
49,235	+				-0.0
49,235	+				-0.0
49,235	+				-3.5
49,235	+				-1.5
49,235	+				-0.0
49,235	+				-2.6
49,236	-				-1.6
49,236	-				-0.0
49,236	-				-2.2
49,236	-				-2.8
49,236	-				-0.0
49,261	+				-0.0
49,262	-				-0.0
49,285	+				-2.8
49,312	+				-0.0
49,312	+				-0.0
49,358	+				-0.0
49,359	-				-0.0
49,359	-				-0.0
49,359	-				-2.7
49,379	+				-0.0
49,379	+				-3.0
49,379	+				-0.0
49,379	+				-3.0
49,380	-				-3.1
49,380	-				-0.0
49,431	+				-0.0
49,431	+				-0.0
49,432	-				-2.0
49,432	-				-2.2
49,448	+				-1.3
49,459	+				-0.0
49,569	+				-2.3
49,570	-				-0.0
49,659	+				-0.0
49,659	+				-0.0
49,996	+		Pf1N1B4_5293	0.48	-0.0
49,996	+		Pf1N1B4_5293	0.48	-0.0
49,996	+		Pf1N1B4_5293	0.48	-3.4
49,996	+		Pf1N1B4_5293	0.48	-4.6
49,996	+		Pf1N1B4_5293	0.48	-0.0
49,997	-		Pf1N1B4_5293	0.49	-0.0
50,009	-		Pf1N1B4_5293	0.54	-0.0
50,010	+		Pf1N1B4_5293	0.55	-0.0
50,011	-		Pf1N1B4_5293	0.55	-0.0
50,011	-		Pf1N1B4_5293	0.55	-0.0
50,152	+				-0.0
50,152	+				-2.8
50,153	-				-2.3
50,266	-		Pf1N1B4_5294	0.83	-2.5
50,266	-		Pf1N1B4_5294	0.83	-0.0
50,329	+				-0.0
50,330	-				-0.0
50,374	+				-2.9
50,374	+				-0.0
50,383	+				-0.0
50,530	+		Pf1N1B4_5295	0.47	-0.0
50,530	+		Pf1N1B4_5295	0.47	-4.3
50,530	+		Pf1N1B4_5295	0.47	-1.5
50,530	+		Pf1N1B4_5295	0.47	-2.5
50,530	+		Pf1N1B4_5295	0.47	-0.0
50,530	+		Pf1N1B4_5295	0.47	-2.3
50,530	+		Pf1N1B4_5295	0.47	-0.0
50,530	+		Pf1N1B4_5295	0.47	-0.0
50,530	+				-0.0
50,530	+		Pf1N1B4_5295	0.47	-1.9
50,531	-		Pf1N1B4_5295	0.48	-0.0
50,531	-				-4.4
50,531	-		Pf1N1B4_5295	0.48	-0.0
50,531	-		Pf1N1B4_5295	0.48	-0.0
50,557	-		Pf1N1B4_5295	0.57	-1.9
50,557	-		Pf1N1B4_5295	0.57	-0.0
50,582	+		Pf1N1B4_5295	0.66	-0.0
50,596	-		Pf1N1B4_5295	0.71	-0.0
50,658	+				-0.0
50,658	+				-0.0
50,699	-				-0.0
50,791	+				-3.7
50,974	+		Pf1N1B4_5296	0.40	-2.7
50,974	+		Pf1N1B4_5296	0.40	-0.0
50,974	+		Pf1N1B4_5296	0.40	-3.2
50,974	+				-4.0
50,974	+		Pf1N1B4_5296	0.40	-0.0
50,974	+				-2.1
50,974	+		Pf1N1B4_5296	0.40	-2.1
50,974	+		Pf1N1B4_5296	0.40	-0.0
50,974	+		Pf1N1B4_5296	0.40	-0.0
50,975	-		Pf1N1B4_5296	0.40	-3.1
50,975	-		Pf1N1B4_5296	0.40	-2.3
50,975	-		Pf1N1B4_5296	0.40	-0.0
51,001	+		Pf1N1B4_5296	0.51	-0.0
51,001	+		Pf1N1B4_5296	0.51	-1.6
51,002	-		Pf1N1B4_5296	0.51	-2.3
51,034	-		Pf1N1B4_5296	0.64	-3.2