Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4801
Experiment: Nitrate reduction, replicate C t1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nitrate reduction, replicate C t1 |
|---|---|---|---|---|---|
| remove | |||||
| 5,304,098 | - | -1.5 | |||
| 5,304,141 | + | -3.5 | |||
| 5,304,162 | + | +0.0 | |||
| 5,304,246 | - | Pf1N1B4_4801 | 0.13 | +0.0 | |
| 5,304,339 | + | Pf1N1B4_4801 | 0.23 | -2.8 | |
| 5,304,339 | + | Pf1N1B4_4801 | 0.23 | +0.0 | |
| 5,304,394 | + | Pf1N1B4_4801 | 0.30 | +0.0 | |
| 5,304,403 | - | Pf1N1B4_4801 | 0.31 | -3.0 | |
| 5,304,715 | - | Pf1N1B4_4801 | 0.66 | -2.8 | |
| 5,304,957 | + | -1.0 | |||
| 5,305,229 | - | Pf1N1B4_4802 | 0.26 | -2.0 | |
| 5,305,291 | + | Pf1N1B4_4802 | 0.33 | -1.4 | |
| 5,305,291 | + | Pf1N1B4_4802 | 0.33 | +0.0 | |
| 5,305,361 | - | -2.5 | |||
| 5,305,394 | - | Pf1N1B4_4802 | 0.45 | +1.0 | |
| 5,305,735 | + | +0.0 | |||
| 5,305,874 | - | -2.5 | |||
| 5,305,877 | + | -1.5 | |||
| 5,305,877 | + | -3.6 | |||
| 5,305,878 | - | -2.2 | |||
| 5,305,878 | - | -2.4 | |||
| 5,305,879 | + | -1.5 | |||
| 5,305,880 | - | +0.0 | |||
| 5,305,883 | + | +0.0 |
Or see this region's nucleotide sequence