Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4494

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
4,955,873	-		Pf1N1B4_4493	0.14	+0.0
4,955,982	+		Pf1N1B4_4493	0.25	+0.0
4,956,128	+		Pf1N1B4_4493	0.41	-1.1
4,956,321	-		Pf1N1B4_4493	0.61	+0.0
4,956,378	+		Pf1N1B4_4493	0.67	-1.8
4,956,378	+				+0.0
4,956,378	+		Pf1N1B4_4493	0.67	-3.2
4,956,379	-				-2.6
4,956,379	-		Pf1N1B4_4493	0.67	-1.0
4,956,379	-		Pf1N1B4_4493	0.67	-1.4
4,956,379	-		Pf1N1B4_4493	0.67	-1.8
4,956,379	-				+0.0
4,956,504	+		Pf1N1B4_4493	0.80	+0.0
4,956,505	-		Pf1N1B4_4493	0.80	+0.0
4,956,505	-		Pf1N1B4_4493	0.80	+0.0
4,956,947	-		Pf1N1B4_4494	0.18	-3.2
4,957,176	+		Pf1N1B4_4494	0.37	+0.0
4,957,674	+				+0.0
4,957,887	+				-2.1
4,957,900	-				+0.0
4,957,949	+				-2.5
4,957,974	+				+0.0
4,957,986	-				-2.6
4,958,007	+				+0.0
4,958,008	-				-2.2
4,958,010	+				-4.7
4,958,045	+				+0.0
4,958,045	+				-2.1
4,958,045	+				-3.3
4,958,190	+		Pf1N1B4_4495	0.87	+0.0
4,958,193	+		Pf1N1B4_4495	0.89	+0.0
4,958,194	-				-3.2
4,958,194	-				-1.8
4,958,251	+				+0.0
4,958,251	+				-2.4
4,958,252	-				+0.0
4,958,653	+				+0.0
4,958,654	-		Pf1N1B4_4496	0.74	+0.0
4,958,685	+				-1.9
4,958,685	+		Pf1N1B4_4496	0.81	+0.0
4,958,686	-				+0.0
4,958,742	+				+0.0
4,958,743	-				+0.0
4,958,848	-				+0.0
4,958,889	+				-3.7
4,958,889	+		Pf1N1B4_4497	0.13	-3.7