Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4376

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
4,832,262	+		Pf1N1B4_4375	0.38	+0.0
4,832,262	+		Pf1N1B4_4375	0.38	+0.0
4,832,263	-		Pf1N1B4_4375	0.38	+0.0
4,832,263	-		Pf1N1B4_4375	0.38	+0.0
4,832,263	-		Pf1N1B4_4375	0.38	+0.0
4,832,263	-				+0.0
4,832,312	-		Pf1N1B4_4375	0.41	+0.0
4,832,423	-				+0.0
4,832,550	+		Pf1N1B4_4375	0.59	-1.9
4,832,763	+		Pf1N1B4_4375	0.74	-2.4
4,832,763	+		Pf1N1B4_4375	0.74	+0.0
4,832,763	+		Pf1N1B4_4375	0.74	+0.0
4,832,763	+		Pf1N1B4_4375	0.74	+0.0
4,832,764	-		Pf1N1B4_4375	0.75	+0.0
4,832,764	-				-2.7
4,832,764	-		Pf1N1B4_4375	0.75	+0.0
4,832,764	-		Pf1N1B4_4375	0.75	+0.0
4,832,764	-		Pf1N1B4_4375	0.75	-4.0
4,832,862	+		Pf1N1B4_4375	0.82	-2.1
4,832,862	+		Pf1N1B4_4375	0.82	-2.0
4,832,863	-		Pf1N1B4_4375	0.82	+0.0
4,832,907	+		Pf1N1B4_4375	0.85	+0.0
4,832,907	+		Pf1N1B4_4375	0.85	+0.0
4,833,174	+				+0.0
4,833,402	+				+0.0
4,833,402	+		Pf1N1B4_4376	0.30	+0.0
4,833,402	+		Pf1N1B4_4376	0.30	-2.7
4,833,406	+		Pf1N1B4_4376	0.31	-2.8
4,833,406	+		Pf1N1B4_4376	0.31	+0.0
4,833,406	+				-2.7
4,833,407	-		Pf1N1B4_4376	0.31	+0.0
4,833,407	-		Pf1N1B4_4376	0.31	-2.9
4,833,407	-		Pf1N1B4_4376	0.31	-2.4
4,833,407	-		Pf1N1B4_4376	0.31	-3.3
4,834,081	+				+0.0
4,834,082	-				+0.0
4,834,082	-				+0.0
4,834,082	-				-2.4
4,834,115	-				-4.0
4,834,137	-				+0.0
4,834,196	-				+0.0
4,834,203	+				+0.0
4,834,439	+		Pf1N1B4_4377	0.41	+0.0
4,834,440	-		Pf1N1B4_4377	0.41	-3.4
4,834,628	+		Pf1N1B4_4377	0.71	-1.6
4,834,700	+		Pf1N1B4_4377	0.83	-1.5
4,834,701	-		Pf1N1B4_4377	0.83	-1.5
4,834,778	+				-1.8
4,834,779	-				+0.0
4,834,849	+				+0.0
4,834,858	-				-3.5
4,834,922	+				+0.0
4,834,922	+				-2.6
4,834,922	+				-2.4
4,834,954	+				+0.0
4,834,954	+				+0.0
4,834,954	+				+0.0
4,834,954	+				-2.7