Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4335

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
4,793,961	+		Pf1N1B4_4334	0.50	-3.7
4,793,961	+		Pf1N1B4_4334	0.50	+0.0
4,793,961	+		Pf1N1B4_4334	0.50	+0.0
4,793,962	-		Pf1N1B4_4334	0.50	+0.0
4,793,962	-		Pf1N1B4_4334	0.50	-2.1
4,794,282	+		Pf1N1B4_4334	0.83	-1.8
4,794,285	+		Pf1N1B4_4334	0.83	+0.0
4,794,285	+		Pf1N1B4_4334	0.83	+0.0
4,794,286	-		Pf1N1B4_4334	0.83	+0.0
4,794,286	-		Pf1N1B4_4334	0.83	+0.0
4,794,286	-		Pf1N1B4_4334	0.83	+0.0
4,794,400	-				-2.4
4,794,401	+				+0.0
4,794,401	+				-1.8
4,794,402	-				-2.8
4,794,419	+				-1.4
4,794,419	+				+0.0
4,794,671	+		Pf1N1B4_4335	0.29	-0.5
4,794,671	+		Pf1N1B4_4335	0.29	+0.0
4,794,713	+		Pf1N1B4_4335	0.40	+0.0
4,794,713	+		Pf1N1B4_4335	0.40	+0.0
4,794,713	+		Pf1N1B4_4335	0.40	+0.0
4,794,714	-		Pf1N1B4_4335	0.40	+0.0
4,794,714	-		Pf1N1B4_4335	0.40	+0.0
4,794,966	+				+0.0
4,795,190	-				+0.0
4,795,190	-				+0.0
4,795,190	-				-2.1
4,795,195	-				+0.0
4,795,197	-				-2.5
4,795,266	+				+0.0
4,795,267	-				-2.0
4,795,267	-				+0.0
4,795,267	-				-2.2
4,795,400	+				+0.0
4,795,469	+		Pf1N1B4_4336	0.34	+0.0
4,795,469	+		Pf1N1B4_4336	0.34	-3.4
4,795,470	-		Pf1N1B4_4336	0.34	-1.3
4,795,470	-		Pf1N1B4_4336	0.34	-2.4
4,795,580	+				+0.0
4,795,580	+		Pf1N1B4_4336	0.51	-2.7
4,795,759	-				-2.6
4,795,809	-				+0.0