Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4233
Experiment: Nitrate reduction, replicate C t1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Nitrate reduction, replicate C t1 |
---|---|---|---|---|---|
remove | |||||
4,690,589 | + | -3.0 | |||
4,690,589 | + | +0.0 | |||
4,690,904 | + | Pf1N1B4_4231 | 0.58 | +0.0 | |
4,690,905 | - | Pf1N1B4_4231 | 0.58 | -4.0 | |
4,690,931 | - | Pf1N1B4_4231 | 0.65 | +0.0 | |
4,690,945 | + | -2.1 | |||
4,690,945 | + | -1.8 | |||
4,690,946 | - | +0.0 | |||
4,691,169 | - | Pf1N1B4_4232 | 0.57 | +0.0 | |
4,691,169 | - | Pf1N1B4_4232 | 0.57 | -2.6 | |
4,691,304 | + | +0.0 | |||
4,691,414 | + | +0.0 | |||
4,691,456 | + | +0.0 | |||
4,692,454 | + | -1.8 | |||
4,692,643 | - | +0.0 | |||
4,693,033 | - | Pf1N1B4_4234 | 0.36 | -1.0 | |
4,693,122 | + | Pf1N1B4_4234 | 0.43 | -3.6 | |
4,693,247 | + | Pf1N1B4_4234 | 0.52 | +0.0 | |
4,693,248 | - | Pf1N1B4_4234 | 0.52 | +0.0 | |
4,693,348 | - | Pf1N1B4_4234 | 0.60 | -2.4 |
Or see this region's nucleotide sequence