Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3980

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
4,420,963	+		Pf1N1B4_3979	0.62	-1.4
4,420,964	-		Pf1N1B4_3979	0.62	-2.3
4,420,964	-		Pf1N1B4_3979	0.62	-1.7
4,420,964	-		Pf1N1B4_3979	0.62	+0.0
4,421,322	-		Pf1N1B4_3979	0.89	-1.0
4,421,377	+				-1.6
4,421,378	-				+0.0
4,421,378	-				+0.0
4,421,380	+				-3.4
4,421,380	+				+0.0
4,421,380	+				+0.0
4,421,380	+				+0.0
4,421,381	-				-2.2
4,421,381	-				-2.2
4,421,381	-				-1.8
4,421,381	-				-2.7
4,421,381	-				-4.7
4,421,488	-				-1.5
4,421,499	+				+0.0
4,421,499	+				-2.6
4,421,499	+				-2.3
4,421,500	-				-2.7
4,421,500	-				-2.7
4,421,500	-				+1.0
4,421,522	-				+0.0
4,421,796	+		Pf1N1B4_3980	0.52	-2.6
4,421,796	+		Pf1N1B4_3980	0.52	-3.7
4,421,796	+		Pf1N1B4_3980	0.52	+0.0
4,421,797	-		Pf1N1B4_3980	0.52	-3.6
4,421,839	+		Pf1N1B4_3980	0.62	+0.0
4,421,840	-		Pf1N1B4_3980	0.62	+0.0
4,422,589	+				+0.0
4,422,740	+		Pf1N1B4_3981	0.59	+0.0
4,422,868	+		Pf1N1B4_3981	0.70	+0.0
4,422,964	+		Pf1N1B4_3981	0.78	+0.0
4,422,983	-		Pf1N1B4_3981	0.80	+0.0