Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3391

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
3,784,078	-				-0.0
3,784,086	+				-1.0
3,784,086	+				-0.0
3,784,162	+				-2.6
3,784,163	-				-0.0
3,784,163	-				-0.0
3,784,175	+				-0.0
3,784,175	+				-2.1
3,784,272	+				-0.0
3,784,331	+		Pf1N1B4_3390	0.13	-0.0
3,784,332	-		Pf1N1B4_3390	0.13	-2.1
3,784,332	-		Pf1N1B4_3390	0.13	-0.0
3,784,332	-		Pf1N1B4_3390	0.13	-0.0
3,784,359	-		Pf1N1B4_3390	0.18	-0.0
3,784,359	-		Pf1N1B4_3390	0.18	-2.4
3,784,897	+		Pf1N1B4_3391	0.16	-4.8
3,784,897	+		Pf1N1B4_3391	0.16	-0.0
3,785,033	+				-0.9
3,785,093	-				-0.0
3,785,129	-				-1.3
3,785,129	-				-1.7
3,785,129	-				-0.0
3,785,297	+				-0.0
3,785,297	+				-2.3
3,785,298	-				-0.0
3,785,429	+				-1.4
3,785,512	+		Pf1N1B4_3392	0.14	-0.0
3,785,513	-		Pf1N1B4_3392	0.14	-0.0
3,785,534	-		Pf1N1B4_3392	0.15	-0.0
3,785,534	-		Pf1N1B4_3392	0.15	-0.0
3,785,534	-		Pf1N1B4_3392	0.15	-0.0
3,785,534	-		Pf1N1B4_3392	0.15	-0.0
3,785,566	+		Pf1N1B4_3392	0.18	-2.6
3,785,566	+		Pf1N1B4_3392	0.18	-0.0
3,785,566	+		Pf1N1B4_3392	0.18	-0.0
3,785,566	+		Pf1N1B4_3392	0.18	-0.0
3,785,566	+		Pf1N1B4_3392	0.18	-0.0
3,785,567	-		Pf1N1B4_3392	0.18	-2.5
3,785,567	-		Pf1N1B4_3392	0.18	-3.9
3,785,567	-				-0.0
3,785,605	+				-3.2
3,785,605	+		Pf1N1B4_3392	0.21	-0.0
3,785,605	+		Pf1N1B4_3392	0.21	-4.5
3,785,606	-		Pf1N1B4_3392	0.21	-0.0
3,785,606	-		Pf1N1B4_3392	0.21	-2.9
3,785,620	+		Pf1N1B4_3392	0.22	-0.0
3,785,621	-				-0.0
3,785,621	-				-0.0
3,785,632	+		Pf1N1B4_3392	0.23	-0.0
3,785,632	+		Pf1N1B4_3392	0.23	-0.0
3,785,671	+		Pf1N1B4_3392	0.26	-0.0
3,785,671	+		Pf1N1B4_3392	0.26	-0.0
3,785,695	+		Pf1N1B4_3392	0.27	-0.0
3,785,696	-		Pf1N1B4_3392	0.28	-0.0
3,785,807	-		Pf1N1B4_3392	0.36	-0.0
3,785,807	-		Pf1N1B4_3392	0.36	-4.7
3,785,884	+		Pf1N1B4_3392	0.42	-2.0
3,785,885	-		Pf1N1B4_3392	0.42	-0.0
3,785,885	-		Pf1N1B4_3392	0.42	-0.0