Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2776

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
3,115,967	-		Pf1N1B4_2775	0.90	+0.0
3,116,192	+				+0.0
3,116,193	-				+0.0
3,116,193	-				-3.2
3,116,196	+				+0.0
3,116,196	+				+0.0
3,116,196	+				+0.0
3,116,196	+				+0.0
3,116,196	+				+0.0
3,116,196	+				+0.0
3,116,196	+				-1.2
3,116,197	-				-1.0
3,116,197	-				+0.0
3,116,197	-				+0.0
3,116,205	-				-0.2
3,116,342	-				-0.4
3,116,342	-				+0.0
3,116,450	+				-2.9
3,116,450	+				+0.0
3,116,450	+				+0.0
3,116,451	-				-2.0
3,116,451	-				-2.7
3,116,451	-				+0.0
3,117,118	+		Pf1N1B4_2776	0.23	-2.8
3,117,221	+		Pf1N1B4_2776	0.37	-2.8
3,117,613	+		Pf1N1B4_2776	0.89	+0.0
3,117,626	-				+0.0
3,117,626	-				-2.3
3,117,643	-				+0.0
3,117,643	-				+0.0
3,117,668	+				-3.8
3,117,668	+				+0.0
3,117,669	-				+0.0
3,117,669	-				+0.0
3,117,669	-				+0.0
3,117,698	+				+0.0
3,117,698	+				-2.3
3,117,698	+				+0.0
3,117,698	+				+0.0
3,117,698	+				+0.0
3,117,699	-				+0.0
3,117,699	-				-4.1
3,117,699	-				-2.7
3,117,699	-				-3.2
3,117,699	-				-2.7
3,117,699	-				+0.0
3,117,752	+				-2.4
3,117,752	+				+0.0
3,117,752	+				-2.2
3,117,752	+				+0.0
3,117,752	+				+0.0
3,117,752	+				+0.0
3,117,752	+				+0.0
3,117,752	+				+0.0
3,117,752	+				+0.0
3,117,752	+				-2.1
3,117,753	-				+0.0
3,117,753	-				+0.0
3,117,753	-				-3.3
3,117,753	-				-3.0
3,117,753	-				-2.7
3,117,753	-				-3.2
3,117,754	+				+0.0
3,117,898	-		Pf1N1B4_2777	0.15	+0.0
3,117,906	+		Pf1N1B4_2777	0.16	-2.6
3,117,907	-		Pf1N1B4_2777	0.16	+0.0
3,118,090	+		Pf1N1B4_2777	0.30	+0.0
3,118,090	+		Pf1N1B4_2777	0.30	-2.8
3,118,090	+		Pf1N1B4_2777	0.30	-3.3
3,118,090	+		Pf1N1B4_2777	0.30	+0.0
3,118,090	+				-0.4
3,118,091	-		Pf1N1B4_2777	0.30	-2.2
3,118,249	+		Pf1N1B4_2777	0.42	+0.0
3,118,250	-		Pf1N1B4_2777	0.42	+0.0
3,118,250	-		Pf1N1B4_2777	0.42	+0.0
3,118,250	-		Pf1N1B4_2777	0.42	+0.0
3,118,250	-		Pf1N1B4_2777	0.42	-2.0
3,118,320	+		Pf1N1B4_2777	0.47	+0.0
3,118,333	+				-2.0
3,118,333	+		Pf1N1B4_2777	0.48	-3.0
3,118,334	-		Pf1N1B4_2777	0.48	-1.3
3,118,334	-		Pf1N1B4_2777	0.48	+0.0
3,118,334	-		Pf1N1B4_2777	0.48	+0.0
3,118,334	-		Pf1N1B4_2777	0.48	+0.0
3,118,334	-		Pf1N1B4_2777	0.48	-3.8
3,118,381	+		Pf1N1B4_2777	0.52	+0.0
3,118,381	+		Pf1N1B4_2777	0.52	+0.0
3,118,381	+		Pf1N1B4_2777	0.52	-1.0
3,118,381	+		Pf1N1B4_2777	0.52	+0.0
3,118,382	-		Pf1N1B4_2777	0.52	+0.0
3,118,382	-		Pf1N1B4_2777	0.52	+0.0
3,118,385	+		Pf1N1B4_2777	0.52	-1.6
3,118,385	+		Pf1N1B4_2777	0.52	+0.0
3,118,385	+		Pf1N1B4_2777	0.52	-3.5
3,118,385	+		Pf1N1B4_2777	0.52	-1.2
3,118,386	-		Pf1N1B4_2777	0.52	+0.0
3,118,386	-		Pf1N1B4_2777	0.52	+0.0
3,118,386	-		Pf1N1B4_2777	0.52	+0.0
3,118,386	-		Pf1N1B4_2777	0.52	+0.0
3,118,493	+		Pf1N1B4_2777	0.60	+0.0
3,118,493	+		Pf1N1B4_2777	0.60	+0.0