Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2464

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
2,793,912	+		Pf1N1B4_2463	0.39	-0.0
2,793,930	+		Pf1N1B4_2463	0.41	-0.0
2,793,931	-		Pf1N1B4_2463	0.41	-0.0
2,793,931	-		Pf1N1B4_2463	0.41	-0.0
2,793,931	-		Pf1N1B4_2463	0.41	-3.0
2,793,931	-		Pf1N1B4_2463	0.41	-0.0
2,793,960	+		Pf1N1B4_2463	0.44	-0.0
2,793,960	+		Pf1N1B4_2463	0.44	-4.7
2,793,960	+		Pf1N1B4_2463	0.44	-1.7
2,793,961	-		Pf1N1B4_2463	0.44	-5.2
2,793,961	-		Pf1N1B4_2463	0.44	-0.0
2,793,961	-		Pf1N1B4_2463	0.44	-0.0
2,793,984	-		Pf1N1B4_2463	0.47	-0.0
2,794,057	-		Pf1N1B4_2463	0.55	-0.0
2,794,057	-		Pf1N1B4_2463	0.55	-1.3
2,794,203	+		Pf1N1B4_2463	0.72	-0.0
2,794,203	+		Pf1N1B4_2463	0.72	-0.0
2,794,203	+		Pf1N1B4_2463	0.72	-2.2
2,794,203	+				-0.0
2,794,203	+		Pf1N1B4_2463	0.72	-0.0
2,794,204	-		Pf1N1B4_2463	0.72	-0.0
2,794,204	-		Pf1N1B4_2463	0.72	-0.0
2,794,204	-		Pf1N1B4_2463	0.72	-2.4
2,794,329	+		Pf1N1B4_2463	0.86	-2.6
2,794,329	+		Pf1N1B4_2463	0.86	-3.0
2,794,330	-		Pf1N1B4_2463	0.86	-0.0
2,794,453	+				-0.0
2,794,453	+				-0.0
2,794,453	+				-0.0
2,794,453	+				-0.0
2,794,453	+				-0.0
2,794,453	+				-0.0
2,794,454	-				-2.0
2,794,454	-				-0.0
2,794,454	-				-0.0
2,794,454	-				-0.0
2,794,488	+				-0.0
2,794,489	-				-0.0
2,794,489	-				-0.0
2,794,563	-				-2.3
2,794,690	-				-0.0
2,794,725	-				-0.0
2,794,809	-		Pf1N1B4_2464	0.16	-2.9
2,794,809	-		Pf1N1B4_2464	0.16	-0.0
2,794,809	-		Pf1N1B4_2464	0.16	-0.0
2,794,970	+		Pf1N1B4_2464	0.48	-0.0
2,794,970	+		Pf1N1B4_2464	0.48	-3.6
2,794,970	+		Pf1N1B4_2464	0.48	-0.0
2,794,971	-		Pf1N1B4_2464	0.48	-0.0
2,794,971	-		Pf1N1B4_2464	0.48	-3.2
2,795,101	+		Pf1N1B4_2464	0.74	-0.0
2,795,101	+		Pf1N1B4_2464	0.74	-0.0
2,795,272	+				-0.0
2,795,272	+				-0.0
2,795,273	-				-2.2
2,795,273	-				-2.4
2,795,273	-				-0.0
2,795,273	-				-0.0
2,795,273	-				-0.0
2,795,276	+				-0.0
2,795,371	-		Pf1N1B4_2465	0.11	-2.2
2,795,584	+		Pf1N1B4_2465	0.43	-2.0
2,795,584	+		Pf1N1B4_2465	0.43	-0.0
2,795,719	+		Pf1N1B4_2465	0.63	-0.0
2,795,719	+		Pf1N1B4_2465	0.63	-2.1
2,795,953	+				-3.7
2,795,954	-				-0.0
2,795,954	-				-0.0
2,796,003	+				-0.0
2,796,003	+				-0.0
2,796,003	+				-0.0
2,796,003	+				-0.0
2,796,003	+				-0.0
2,796,004	-				-2.8
2,796,004	-				-0.0
2,796,004	-				-0.0
2,796,192	+		Pf1N1B4_2466	0.15	-0.0
2,796,218	+		Pf1N1B4_2466	0.17	-1.4
2,796,218	+		Pf1N1B4_2466	0.17	-0.0
2,796,219	-		Pf1N1B4_2466	0.17	-0.0
2,796,219	-		Pf1N1B4_2466	0.17	-0.0
2,796,219	-		Pf1N1B4_2466	0.17	-0.0