Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2172

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
2,484,336	+				-0.0
2,484,368	+				-3.9
2,484,368	+				-0.0
2,484,368	+				-1.6
2,484,404	+				-0.0
2,484,404	+				-0.0
2,484,404	+				-0.0
2,484,404	+				+1.0
2,484,404	+				-2.2
2,484,405	-				-0.0
2,484,405	-				-0.0
2,484,405	-				-0.0
2,484,797	+		Pf1N1B4_2171	0.53	-0.0
2,484,798	-		Pf1N1B4_2171	0.53	-0.0
2,484,798	-		Pf1N1B4_2171	0.53	-0.0
2,484,967	+		Pf1N1B4_2171	0.72	-2.0
2,484,967	+		Pf1N1B4_2171	0.72	-0.0
2,484,967	+		Pf1N1B4_2171	0.72	-1.7
2,484,967	+		Pf1N1B4_2171	0.72	-3.4
2,484,977	+		Pf1N1B4_2171	0.73	-2.2
2,484,977	+		Pf1N1B4_2171	0.73	-0.0
2,484,978	-		Pf1N1B4_2171	0.73	-0.0
2,485,148	+				-0.0
2,485,227	+				-0.0
2,485,286	-				-0.0
2,485,286	-				-1.4
2,485,286	-				-1.6
2,485,286	-				-1.3
2,485,286	-				-0.0
2,485,318	+		Pf1N1B4_2172	0.13	-0.0
2,485,318	+		Pf1N1B4_2172	0.13	-0.0
2,485,318	+		Pf1N1B4_2172	0.13	-0.0
2,485,318	+		Pf1N1B4_2172	0.13	-0.0
2,485,319	-				-0.0
2,485,319	-		Pf1N1B4_2172	0.13	-1.6
2,485,319	-		Pf1N1B4_2172	0.13	-0.0
2,485,319	-		Pf1N1B4_2172	0.13	-0.3
2,485,626	+		Pf1N1B4_2172	0.56	-2.2
2,485,626	+		Pf1N1B4_2172	0.56	-0.0
2,485,627	-		Pf1N1B4_2172	0.56	-0.0
2,485,627	-		Pf1N1B4_2172	0.56	-0.5
2,485,627	-		Pf1N1B4_2172	0.56	-0.0
2,485,821	+		Pf1N1B4_2172	0.83	-1.8
2,485,821	+		Pf1N1B4_2172	0.83	-2.1
2,485,821	+		Pf1N1B4_2172	0.83	-0.0
2,485,822	-		Pf1N1B4_2172	0.83	-0.0
2,485,822	-		Pf1N1B4_2172	0.83	-1.8
2,485,822	-		Pf1N1B4_2172	0.83	-0.9
2,485,918	-				-0.0
2,485,982	+				-2.8
2,485,982	+				-0.0
2,485,982	+				-0.0
2,485,982	+				-0.0
2,485,983	-				-0.0
2,485,983	-				-0.0
2,485,983	-				-1.4
2,486,071	+		Pf1N1B4_2173	0.13	-0.0
2,486,369	+		Pf1N1B4_2173	0.49	-0.5
2,486,369	+		Pf1N1B4_2173	0.49	-0.0
2,486,370	-		Pf1N1B4_2173	0.49	-0.0
2,486,370	-		Pf1N1B4_2173	0.49	-0.0
2,486,370	-		Pf1N1B4_2173	0.49	-0.0
2,486,370	-		Pf1N1B4_2173	0.49	-2.5
2,486,796	+				-0.7
2,486,797	-				-2.5