Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2045

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
2,333,119	+				-0.0
2,333,119	+				-0.0
2,333,120	-				-3.7
2,333,120	-				-0.0
2,333,157	+				-0.0
2,333,158	-				-0.0
2,333,158	-				-0.0
2,333,159	+				-1.8
2,333,159	+				-1.6
2,333,159	+				-0.0
2,333,160	-				-1.0
2,333,160	-				-0.0
2,333,160	-				-0.0
2,333,160	-				-0.0
2,333,160	-				-3.3
2,333,160	-				-0.0
2,333,160	-				-0.0
2,333,160	-				-0.0
2,333,160	-				-1.9
2,333,160	-				-0.0
2,333,183	+				-2.3
2,333,183	+				-0.0
2,333,183	+				-1.8
2,333,183	+				-0.0
2,333,183	+				-2.4
2,333,183	+				-0.0
2,333,184	-				-0.0
2,333,184	-				-0.0
2,333,184	-				-0.0
2,333,184	-				-0.0
2,333,184	-				-2.5
2,333,184	-				-0.0
2,333,184	-				-3.7
2,333,227	+				-0.7
2,333,227	+				-1.3
2,333,240	+				-0.0
2,333,241	-				-1.0
2,333,303	+		Pf1N1B4_2044	0.18	-1.6
2,333,303	+		Pf1N1B4_2044	0.18	-0.0
2,333,303	+		Pf1N1B4_2044	0.18	-0.0
2,333,303	+		Pf1N1B4_2044	0.18	-0.0
2,333,303	+		Pf1N1B4_2044	0.18	-2.1
2,333,303	+		Pf1N1B4_2044	0.18	-1.9
2,333,303	+		Pf1N1B4_2044	0.18	-0.0
2,333,303	+		Pf1N1B4_2044	0.18	-0.0
2,333,303	+		Pf1N1B4_2044	0.18	-3.1
2,333,303	+		Pf1N1B4_2044	0.18	-0.0
2,333,303	+		Pf1N1B4_2044	0.18	-0.0
2,333,304	-		Pf1N1B4_2044	0.18	-0.0
2,333,304	-		Pf1N1B4_2044	0.18	-0.0
2,333,304	-		Pf1N1B4_2044	0.18	-0.0
2,333,304	-		Pf1N1B4_2044	0.18	-0.0
2,333,304	-		Pf1N1B4_2044	0.18	-0.0
2,333,304	-		Pf1N1B4_2044	0.18	-0.0
2,333,304	-		Pf1N1B4_2044	0.18	-0.0
2,333,304	-		Pf1N1B4_2044	0.18	-2.3
2,333,304	-				-0.9
2,333,304	-		Pf1N1B4_2044	0.18	-4.3
2,333,348	+		Pf1N1B4_2044	0.24	-1.7
2,333,348	+		Pf1N1B4_2044	0.24	-2.9
2,333,348	+		Pf1N1B4_2044	0.24	-0.0
2,333,348	+		Pf1N1B4_2044	0.24	-3.5
2,333,349	-		Pf1N1B4_2044	0.24	-0.0
2,333,349	-		Pf1N1B4_2044	0.24	-2.8
2,333,564	+		Pf1N1B4_2044	0.55	-1.9
2,333,564	+		Pf1N1B4_2044	0.55	-0.0
2,333,564	+		Pf1N1B4_2044	0.55	-2.7
2,333,564	+		Pf1N1B4_2044	0.55	-0.0
2,333,564	+		Pf1N1B4_2044	0.55	-1.8
2,333,564	+		Pf1N1B4_2044	0.55	-0.5
2,333,564	+		Pf1N1B4_2044	0.55	-0.0
2,333,564	+		Pf1N1B4_2044	0.55	-0.0
2,333,564	+		Pf1N1B4_2044	0.55	-2.4
2,333,564	+		Pf1N1B4_2044	0.55	-0.0
2,333,564	+		Pf1N1B4_2044	0.55	-0.0
2,333,565	-		Pf1N1B4_2044	0.56	-0.0
2,333,565	-		Pf1N1B4_2044	0.56	-1.7
2,333,565	-		Pf1N1B4_2044	0.56	-2.6
2,333,565	-		Pf1N1B4_2044	0.56	-0.0
2,333,565	-		Pf1N1B4_2044	0.56	-0.0
2,333,565	-		Pf1N1B4_2044	0.56	-3.7
2,333,790	-		Pf1N1B4_2044	0.88	-2.4
2,333,892	+				-2.7
2,333,892	+				-0.0
2,333,892	+				-0.0
2,333,892	+				-0.0
2,333,892	+				-1.2
2,333,892	+				-0.0
2,333,892	+				-3.5
2,333,892	+				-0.0
2,333,893	-				-2.1
2,333,893	-				+1.0
2,333,893	-				-0.0
2,333,893	-				-0.0
2,333,893	-				-0.0
2,333,911	+				-0.0
2,333,911	+				-1.2
2,333,911	+				-2.8
2,333,911	+				-0.0
2,333,911	+				-0.0
2,333,912	-				-4.8
2,333,912	-				-3.1
2,333,912	-				-2.9
2,333,924	+				-3.6
2,333,924	+				-1.8
2,333,924	+				-0.0
2,333,925	-				-2.5
2,333,943	+				-0.0
2,333,943	+				-0.0
2,333,943	+				-0.0
2,333,943	+				-3.0
2,333,943	+				-0.0
2,333,944	-				-3.6
2,333,979	+				-0.0
2,333,979	+				-0.0
2,333,979	+				-0.0
2,333,979	+				-0.0
2,333,980	-				-2.3
2,333,980	-				-0.0
2,333,980	-				-0.0
2,333,980	-				-1.0
2,333,980	-				-0.0
2,333,980	-				-3.0
2,333,980	-				-1.6
2,333,980	-				-3.8
2,333,986	+				-1.0
2,333,986	+				-2.3
2,333,986	+				-2.8
2,333,986	+				-0.0
2,333,986	+				-2.4
2,333,986	+				-0.0
2,333,987	-				-0.0
2,333,987	-				-2.3
2,333,987	-				-0.0
2,334,147	-		Pf1N1B4_2045	0.33	-3.4
2,334,147	-		Pf1N1B4_2045	0.33	-0.0
2,334,147	-		Pf1N1B4_2045	0.33	-2.9
2,334,147	-				-0.0
2,334,156	+		Pf1N1B4_2045	0.35	-0.0
2,334,156	+		Pf1N1B4_2045	0.35	-0.0
2,334,156	+		Pf1N1B4_2045	0.35	-0.0
2,334,157	+		Pf1N1B4_2045	0.35	-2.7
2,334,157	-		Pf1N1B4_2045	0.35	-0.0
2,334,158	+		Pf1N1B4_2045	0.35	-0.0
2,334,158	+		Pf1N1B4_2045	0.35	-0.0
2,334,158	+		Pf1N1B4_2045	0.35	-0.0
2,334,158	+		Pf1N1B4_2045	0.35	-0.0
2,334,158	+		Pf1N1B4_2045	0.35	-3.5
2,334,158	+		Pf1N1B4_2045	0.35	-0.0
2,334,158	+		Pf1N1B4_2045	0.35	-2.9
2,334,158	+		Pf1N1B4_2045	0.35	-1.7
2,334,158	+		Pf1N1B4_2045	0.35	-0.0
2,334,158	+		Pf1N1B4_2045	0.35	-0.0
2,334,158	+		Pf1N1B4_2045	0.35	-1.3
2,334,159	-		Pf1N1B4_2045	0.36	-2.5
2,334,159	-		Pf1N1B4_2045	0.36	-0.0
2,334,159	-		Pf1N1B4_2045	0.36	-2.0
2,334,159	-		Pf1N1B4_2045	0.36	-2.1
2,334,159	-		Pf1N1B4_2045	0.36	-0.0
2,334,159	-		Pf1N1B4_2045	0.36	-0.0
2,334,159	-		Pf1N1B4_2045	0.36	-0.0
2,334,303	+		Pf1N1B4_2045	0.74	-0.0
2,334,303	+		Pf1N1B4_2045	0.74	-4.1
2,334,303	+		Pf1N1B4_2045	0.74	-0.0
2,334,303	+		Pf1N1B4_2045	0.74	-2.6
2,334,304	-		Pf1N1B4_2045	0.74	-2.8
2,334,304	-		Pf1N1B4_2045	0.74	-3.1
2,334,304	-		Pf1N1B4_2045	0.74	-3.2
2,334,305	+		Pf1N1B4_2045	0.74	-0.0
2,334,305	+		Pf1N1B4_2045	0.74	-0.0
2,334,305	+		Pf1N1B4_2045	0.74	-0.0
2,334,305	+		Pf1N1B4_2045	0.74	-0.0
2,334,305	+		Pf1N1B4_2045	0.74	-0.0
2,334,306	-		Pf1N1B4_2045	0.75	-0.0
2,334,306	-		Pf1N1B4_2045	0.75	-2.9
2,334,306	-		Pf1N1B4_2045	0.75	-2.7
2,334,306	-		Pf1N1B4_2045	0.75	-0.0
2,334,321	+		Pf1N1B4_2045	0.79	-2.0
2,334,321	+		Pf1N1B4_2045	0.79	-0.0
2,334,321	+		Pf1N1B4_2045	0.79	-0.0
2,334,321	+		Pf1N1B4_2045	0.79	-0.0
2,334,321	+		Pf1N1B4_2045	0.79	-0.0
2,334,321	+		Pf1N1B4_2045	0.79	-0.0
2,334,321	+		Pf1N1B4_2045	0.79	-0.0
2,334,322	-		Pf1N1B4_2045	0.79	-0.0
2,334,322	-		Pf1N1B4_2045	0.79	-0.0
2,334,322	-		Pf1N1B4_2045	0.79	-0.0
2,334,322	-		Pf1N1B4_2045	0.79	-0.0
2,334,322	-		Pf1N1B4_2045	0.79	-3.3
2,334,322	-				-3.1
2,334,322	-		Pf1N1B4_2045	0.79	-0.0
2,334,322	-		Pf1N1B4_2045	0.79	-0.0
2,334,322	-		Pf1N1B4_2045	0.79	-0.0
2,334,322	-		Pf1N1B4_2045	0.79	-0.0
2,334,368	+				-0.0
2,334,368	+				-3.9
2,334,390	+				-0.6
2,334,391	-				-0.0
2,334,484	+				-2.2
2,334,491	+				-1.7
2,334,574	+				-1.3