Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1819

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
2,096,234	+		Pf1N1B4_1818	0.13	-3.2
2,096,234	+		Pf1N1B4_1818	0.13	-3.3
2,096,234	+		Pf1N1B4_1818	0.13	-2.3
2,096,234	+		Pf1N1B4_1818	0.13	-0.0
2,096,235	-		Pf1N1B4_1818	0.13	-0.0
2,096,335	-		Pf1N1B4_1818	0.22	-0.0
2,096,499	-				-0.0
2,096,499	-				-0.0
2,096,501	-		Pf1N1B4_1818	0.37	-3.9
2,096,525	+		Pf1N1B4_1818	0.39	-3.2
2,096,525	+		Pf1N1B4_1818	0.39	-0.0
2,096,525	+		Pf1N1B4_1818	0.39	-4.7
2,096,526	-		Pf1N1B4_1818	0.39	-0.0
2,096,528	+		Pf1N1B4_1818	0.39	-0.0
2,096,730	-		Pf1N1B4_1818	0.57	-4.8
2,096,857	+		Pf1N1B4_1818	0.69	-4.5
2,096,857	+		Pf1N1B4_1818	0.69	-3.7
2,096,858	-		Pf1N1B4_1818	0.69	-1.6
2,096,860	+		Pf1N1B4_1818	0.69	-5.0
2,096,860	+		Pf1N1B4_1818	0.69	-3.3
2,096,860	+		Pf1N1B4_1818	0.69	-0.0
2,096,860	+		Pf1N1B4_1818	0.69	-0.0
2,096,861	-		Pf1N1B4_1818	0.69	-0.0
2,096,861	-		Pf1N1B4_1818	0.69	-5.8
2,096,861	-		Pf1N1B4_1818	0.69	-3.6
2,096,896	-		Pf1N1B4_1818	0.72	-0.0
2,097,074	+		Pf1N1B4_1818	0.88	-3.6
2,097,206	+				-1.9
2,097,207	-				-0.0
2,097,235	+				-0.0
2,097,235	+				-0.0
2,097,235	+				-0.0
2,097,235	+				-0.0
2,097,235	+				-0.0
2,097,235	+				-0.0
2,097,235	+				-0.0
2,097,235	+				-0.0
2,097,235	+				-0.0
2,097,235	+				-3.5
2,097,235	+				-0.0
2,097,235	+				-3.6
2,097,235	+				-2.9
2,097,236	-				-0.0
2,097,236	-				-0.0
2,097,236	-				-0.0
2,097,236	-				-2.9
2,097,236	-				-3.6
2,097,236	-				-0.0
2,097,236	-				-2.6
2,097,236	-				-0.0
2,097,236	-				-0.0
2,097,236	-				-0.0
2,097,251	+				-0.0
2,097,251	+				-2.5
2,097,251	+				-0.0
2,097,251	+				-0.0
2,097,251	+				-0.0
2,097,251	+				-3.6
2,097,251	+				-0.0
2,097,251	+				-3.9
2,097,251	+				-3.3
2,097,252	-				-0.0
2,097,252	-				-0.0
2,097,252	-				-0.0
2,097,252	-				-3.7
2,097,252	-				-0.0
2,097,252	-				-3.6
2,097,281	+		Pf1N1B4_1819	0.18	-3.7
2,097,281	+		Pf1N1B4_1819	0.18	-0.0
2,097,281	+		Pf1N1B4_1819	0.18	-0.0
2,097,281	+		Pf1N1B4_1819	0.18	-0.0
2,097,282	-		Pf1N1B4_1819	0.18	-0.0
2,097,282	-		Pf1N1B4_1819	0.18	-0.0
2,097,310	+		Pf1N1B4_1819	0.27	-5.5
2,097,310	+		Pf1N1B4_1819	0.27	-0.0
2,097,311	-		Pf1N1B4_1819	0.27	-3.2
2,097,311	-		Pf1N1B4_1819	0.27	-0.0
2,097,574	+				-3.9
2,097,575	-				-0.0
2,097,653	-				-0.0
2,097,688	-				-5.8
2,097,703	+		Pf1N1B4_1820	0.11	-5.9
2,097,703	+		Pf1N1B4_1820	0.11	-4.5
2,097,703	+		Pf1N1B4_1820	0.11	-0.0
2,097,703	+		Pf1N1B4_1820	0.11	-3.7
2,097,703	+		Pf1N1B4_1820	0.11	-0.0
2,097,703	+		Pf1N1B4_1820	0.11	-3.3
2,097,703	+		Pf1N1B4_1820	0.11	-0.0
2,097,703	+		Pf1N1B4_1820	0.11	-0.0
2,097,703	+		Pf1N1B4_1820	0.11	-0.0
2,097,704	-		Pf1N1B4_1820	0.11	-0.0
2,097,704	-		Pf1N1B4_1820	0.11	-1.8
2,097,704	-		Pf1N1B4_1820	0.11	-4.9
2,097,704	-		Pf1N1B4_1820	0.11	-0.0
2,097,704	-		Pf1N1B4_1820	0.11	-0.0
2,097,704	-		Pf1N1B4_1820	0.11	-0.0
2,097,704	-		Pf1N1B4_1820	0.11	-4.5
2,097,704	-		Pf1N1B4_1820	0.11	-5.7
2,097,704	-		Pf1N1B4_1820	0.11	-0.0
2,097,704	-		Pf1N1B4_1820	0.11	-4.9
2,097,704	-		Pf1N1B4_1820	0.11	-0.0
2,097,704	-		Pf1N1B4_1820	0.11	-0.0
2,097,705	+		Pf1N1B4_1820	0.11	-3.6
2,097,705	+		Pf1N1B4_1820	0.11	-3.9
2,097,705	+		Pf1N1B4_1820	0.11	-4.5
2,097,705	+		Pf1N1B4_1820	0.11	-5.4
2,097,706	-		Pf1N1B4_1820	0.11	-0.0
2,097,706	-		Pf1N1B4_1820	0.11	-0.0
2,097,706	-		Pf1N1B4_1820	0.11	-3.3
2,097,727	-		Pf1N1B4_1820	0.13	-4.6
2,097,743	-		Pf1N1B4_1820	0.14	-0.0
2,097,743	-		Pf1N1B4_1820	0.14	-0.0
2,097,752	+		Pf1N1B4_1820	0.14	-0.0
2,097,752	+		Pf1N1B4_1820	0.14	-0.0
2,097,752	+		Pf1N1B4_1820	0.14	-0.0
2,097,752	+		Pf1N1B4_1820	0.14	-2.5
2,097,752	+				-0.0
2,097,752	+		Pf1N1B4_1820	0.14	-2.7
2,097,752	+		Pf1N1B4_1820	0.14	-0.0
2,097,752	+		Pf1N1B4_1820	0.14	-4.2
2,097,752	+		Pf1N1B4_1820	0.14	-2.2
2,097,752	+		Pf1N1B4_1820	0.14	-5.5
2,097,753	-		Pf1N1B4_1820	0.14	-3.0
2,097,753	-		Pf1N1B4_1820	0.14	-3.2
2,097,853	-		Pf1N1B4_1820	0.21	-0.0
2,098,030	+		Pf1N1B4_1820	0.34	-0.0
2,098,030	+		Pf1N1B4_1820	0.34	-0.0
2,098,030	+		Pf1N1B4_1820	0.34	-4.6
2,098,030	+		Pf1N1B4_1820	0.34	-0.0
2,098,031	-		Pf1N1B4_1820	0.34	-5.4
2,098,031	-		Pf1N1B4_1820	0.34	-0.0
2,098,031	-		Pf1N1B4_1820	0.34	-3.8
2,098,031	-		Pf1N1B4_1820	0.34	-0.0
2,098,031	-				-4.9
2,098,061	+		Pf1N1B4_1820	0.36	-4.3
2,098,062	-		Pf1N1B4_1820	0.36	-0.0
2,098,148	+		Pf1N1B4_1820	0.42	-0.0
2,098,148	+		Pf1N1B4_1820	0.42	-0.0
2,098,148	+		Pf1N1B4_1820	0.42	-0.0
2,098,149	-		Pf1N1B4_1820	0.42	-0.0
2,098,149	-		Pf1N1B4_1820	0.42	-0.0
2,098,255	+		Pf1N1B4_1820	0.49	-3.1
2,098,255	+		Pf1N1B4_1820	0.49	-0.0
2,098,255	+		Pf1N1B4_1820	0.49	-0.0
2,098,255	+		Pf1N1B4_1820	0.49	-3.6
2,098,354	+		Pf1N1B4_1820	0.56	-0.0
2,098,354	+		Pf1N1B4_1820	0.56	-0.0
2,098,354	+		Pf1N1B4_1820	0.56	-0.0
2,098,354	+		Pf1N1B4_1820	0.56	-3.0
2,098,354	+		Pf1N1B4_1820	0.56	-5.1
2,098,354	+		Pf1N1B4_1820	0.56	-0.0
2,098,354	+		Pf1N1B4_1820	0.56	-0.0
2,098,354	+		Pf1N1B4_1820	0.56	-2.2
2,098,355	-		Pf1N1B4_1820	0.56	-0.0
2,098,355	-		Pf1N1B4_1820	0.56	-0.0
2,098,355	-		Pf1N1B4_1820	0.56	-0.0
2,098,355	-		Pf1N1B4_1820	0.56	-0.0
2,098,355	-		Pf1N1B4_1820	0.56	-0.0
2,098,355	-		Pf1N1B4_1820	0.56	-0.0
2,098,359	+		Pf1N1B4_1820	0.57	-0.0
2,098,359	+		Pf1N1B4_1820	0.57	-0.0
2,098,359	+		Pf1N1B4_1820	0.57	-0.0
2,098,359	+		Pf1N1B4_1820	0.57	-0.0
2,098,359	+		Pf1N1B4_1820	0.57	-4.1
2,098,359	+		Pf1N1B4_1820	0.57	-0.0
2,098,359	+		Pf1N1B4_1820	0.57	-3.7
2,098,359	+		Pf1N1B4_1820	0.57	-1.2
2,098,359	+		Pf1N1B4_1820	0.57	-0.0
2,098,359	+		Pf1N1B4_1820	0.57	-0.0
2,098,360	-		Pf1N1B4_1820	0.57	-3.1
2,098,360	-		Pf1N1B4_1820	0.57	-0.0
2,098,360	-		Pf1N1B4_1820	0.57	-3.4
2,098,360	-		Pf1N1B4_1820	0.57	-0.0
2,098,360	-		Pf1N1B4_1820	0.57	-0.0
2,098,360	-		Pf1N1B4_1820	0.57	-0.0
2,098,360	-		Pf1N1B4_1820	0.57	-0.0
2,098,488	+		Pf1N1B4_1820	0.65	-0.0