Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1248

Experiment: Nitrate reduction, replicate C t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t1
1,424,968	-				-1.4
1,425,171	+		Pf1N1B4_1246	0.29	-0.0
1,425,172	-		Pf1N1B4_1246	0.29	-2.6
1,425,172	-		Pf1N1B4_1246	0.29	-3.0
1,425,172	-		Pf1N1B4_1246	0.29	-0.0
1,425,213	+		Pf1N1B4_1246	0.39	-0.0
1,425,520	+				-0.0
1,425,520	+				-0.0
1,425,520	+				-0.0
1,425,520	+				-1.5
1,425,520	+				-0.1
1,425,520	+				-1.4
1,425,521	-				-1.7
1,425,521	-				-0.0
1,425,521	-				-3.7
1,425,521	-				-0.0
1,425,521	-				-0.0
1,425,572	-				-0.0
1,425,644	+		Pf1N1B4_1247	0.25	-0.0
1,425,644	+		Pf1N1B4_1247	0.25	-2.7
1,425,696	+		Pf1N1B4_1247	0.40	-0.0
1,425,697	-		Pf1N1B4_1247	0.40	-0.4
1,425,697	-		Pf1N1B4_1247	0.40	-0.0
1,425,697	-		Pf1N1B4_1247	0.40	-0.0
1,425,697	-		Pf1N1B4_1247	0.40	-0.0
1,425,697	-		Pf1N1B4_1247	0.40	-0.0
1,425,697	-		Pf1N1B4_1247	0.40	-0.0
1,425,697	-		Pf1N1B4_1247	0.40	-2.2
1,425,697	-		Pf1N1B4_1247	0.40	-0.0
1,425,726	-		Pf1N1B4_1247	0.49	-0.0
1,425,896	-				-1.7
1,426,129	-		Pf1N1B4_1248	0.29	-0.0
1,426,378	+				-1.6
1,426,378	+		Pf1N1B4_1248	0.65	-0.0
1,426,379	-		Pf1N1B4_1248	0.65	-3.4
1,426,379	-		Pf1N1B4_1248	0.65	-0.0
1,426,379	-		Pf1N1B4_1248	0.65	-0.0
1,426,379	-		Pf1N1B4_1248	0.65	-2.2
1,426,488	+		Pf1N1B4_1248	0.81	-3.2
1,426,488	+		Pf1N1B4_1248	0.81	-0.0
1,426,488	+		Pf1N1B4_1248	0.81	-3.2
1,426,558	+				-3.5
1,426,558	+				-0.0
1,426,591	+				-2.6
1,426,591	+				-0.0
1,426,591	+				-0.0
1,426,591	+				-0.0
1,426,591	+				-0.0
1,426,592	-				-0.0
1,426,592	-				-0.0
1,426,592	-				-0.0
1,426,592	-				-0.0
1,427,079	+		Pf1N1B4_1249	0.15	+0.0
1,427,080	-		Pf1N1B4_1249	0.15	+0.0
1,427,080	-		Pf1N1B4_1249	0.15	-2.3
1,427,253	+		Pf1N1B4_1249	0.28	+0.0
1,427,253	+		Pf1N1B4_1249	0.28	+0.0
1,427,254	-		Pf1N1B4_1249	0.28	-2.1
1,427,518	+		Pf1N1B4_1249	0.48	+0.0
1,427,519	-		Pf1N1B4_1249	0.48	-2.2
1,427,519	-		Pf1N1B4_1249	0.48	+0.0
1,427,546	+		Pf1N1B4_1249	0.50	+0.0
1,427,557	+		Pf1N1B4_1249	0.50	+0.0
1,427,558	-		Pf1N1B4_1249	0.50	-1.9
1,427,558	-		Pf1N1B4_1249	0.50	-2.0