Experiment: Dilute LB (1/20)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08305 and BWI76_RS08310 are separated by 1 nucleotides BWI76_RS08310 and BWI76_RS08315 are separated by 10 nucleotides BWI76_RS08315 and BWI76_RS08320 are separated by 21 nucleotides
BWI76_RS08305: BWI76_RS08305 - two-component sensor histidine kinase, at 1,756,319 to 1,759,006
_RS08305
BWI76_RS08310: BWI76_RS08310 - potassium-transporting ATPase subunit C, at 1,759,008 to 1,759,583
_RS08310
BWI76_RS08315: BWI76_RS08315 - K+-transporting ATPase subunit B, at 1,759,594 to 1,761,642
_RS08315
BWI76_RS08320: BWI76_RS08320 - potassium-transporting ATPase subunit KdpA, at 1,761,664 to 1,763,343
_RS08320
Position (kb)
1759
1760
1761
1762 Strain fitness (log2 ratio)
-1
0
1
2 at 1758.614 kb on - strand, within BWI76_RS08305 at 1758.665 kb on + strand, within BWI76_RS08305 at 1758.769 kb on + strand at 1759.041 kb on - strand at 1759.200 kb on - strand, within BWI76_RS08310 at 1759.426 kb on - strand, within BWI76_RS08310 at 1759.606 kb on + strand at 1759.952 kb on - strand, within BWI76_RS08315 at 1760.825 kb on + strand, within BWI76_RS08315 at 1761.348 kb on + strand, within BWI76_RS08315 at 1761.442 kb on - strand at 1761.481 kb on + strand at 1761.591 kb on - strand at 1761.743 kb on + strand at 1761.988 kb on + strand, within BWI76_RS08320 at 1762.134 kb on + strand, within BWI76_RS08320 at 1762.265 kb on + strand, within BWI76_RS08320 at 1762.265 kb on + strand, within BWI76_RS08320
Per-strain Table
Position Strand Gene LocusTag Fraction Dilute LB (1/20) remove 1,758,614 - BWI76_RS08305 0.85 +0.1 1,758,665 + BWI76_RS08305 0.87 +0.5 1,758,769 + -0.1 1,759,041 - +0.3 1,759,200 - BWI76_RS08310 0.33 +0.0 1,759,426 - BWI76_RS08310 0.73 -0.3 1,759,606 + +1.2 1,759,952 - BWI76_RS08315 0.17 -1.3 1,760,825 + BWI76_RS08315 0.60 +0.4 1,761,348 + BWI76_RS08315 0.86 -0.5 1,761,442 - +0.2 1,761,481 + +0.5 1,761,591 - +1.2 1,761,743 + -0.1 1,761,988 + BWI76_RS08320 0.19 -0.4 1,762,134 + BWI76_RS08320 0.28 +1.9 1,762,265 + BWI76_RS08320 0.36 +0.2 1,762,265 + BWI76_RS08320 0.36 -0.3
Or see this region's nucleotide sequence