Experiment: MoLS4 with N2 gas (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0451 and DVU0452 are separated by 139 nucleotides DVU0452 and DVU0453 are separated by 429 nucleotides
DVU0451: DVU0451 - chloride channel family protein (TIGR), at 515,765 to 517,576
DVU0451
DVU0452: DVU0452 - hypothetical protein (TIGR), at 517,716 to 518,939
DVU0452
DVU0453: DVU0453 - ATP-dependent DNA helicase, UvrD/REP family (TIGR), at 519,369 to 522,752
DVU0453
Position (kb) 517
518
519 Strain fitness (log2 ratio) -1
0
1
2
3 at 516.719 kb on + strand, within DVU0451 at 516.727 kb on - strand, within DVU0451 at 516.729 kb on + strand, within DVU0451 at 516.739 kb on + strand, within DVU0451 at 516.812 kb on + strand, within DVU0451 at 516.841 kb on - strand, within DVU0451 at 516.971 kb on + strand, within DVU0451 at 516.985 kb on - strand, within DVU0451 at 516.995 kb on - strand, within DVU0451 at 517.024 kb on + strand, within DVU0451 at 517.062 kb on - strand, within DVU0451 at 517.062 kb on - strand, within DVU0451 at 517.096 kb on - strand, within DVU0451 at 517.096 kb on - strand, within DVU0451 at 517.158 kb on + strand, within DVU0451 at 517.205 kb on + strand, within DVU0451 at 517.267 kb on - strand, within DVU0451 at 517.268 kb on + strand, within DVU0451 at 517.365 kb on + strand, within DVU0451 at 517.423 kb on + strand at 517.423 kb on + strand at 517.446 kb on - strand at 517.457 kb on + strand at 517.531 kb on + strand at 517.539 kb on - strand at 517.539 kb on - strand at 517.539 kb on - strand at 517.614 kb on + strand at 517.622 kb on + strand at 517.639 kb on - strand at 517.683 kb on + strand at 517.760 kb on - strand at 517.798 kb on + strand at 517.833 kb on + strand at 517.838 kb on + strand at 517.840 kb on - strand, within DVU0452 at 517.851 kb on - strand, within DVU0452 at 517.893 kb on + strand, within DVU0452 at 517.955 kb on - strand, within DVU0452 at 518.180 kb on - strand, within DVU0452 at 518.208 kb on + strand, within DVU0452 at 518.234 kb on - strand, within DVU0452 at 518.257 kb on - strand, within DVU0452 at 518.259 kb on - strand, within DVU0452 at 518.301 kb on + strand, within DVU0452 at 518.331 kb on - strand, within DVU0452 at 518.406 kb on - strand, within DVU0452 at 518.444 kb on + strand, within DVU0452 at 518.473 kb on + strand, within DVU0452 at 518.563 kb on + strand, within DVU0452 at 518.618 kb on - strand, within DVU0452 at 518.622 kb on + strand, within DVU0452 at 518.625 kb on - strand, within DVU0452 at 518.660 kb on + strand, within DVU0452 at 518.668 kb on - strand, within DVU0452 at 518.939 kb on - strand at 518.941 kb on + strand at 518.941 kb on + strand at 518.941 kb on + strand at 518.941 kb on + strand at 518.942 kb on + strand at 518.969 kb on - strand at 519.045 kb on - strand at 519.086 kb on + strand at 519.147 kb on - strand at 519.152 kb on + strand at 519.181 kb on - strand at 519.319 kb on - strand at 519.344 kb on - strand at 519.377 kb on + strand at 519.409 kb on + strand at 519.409 kb on + strand at 519.409 kb on + strand at 519.479 kb on - strand at 519.707 kb on - strand at 519.707 kb on - strand at 519.709 kb on - strand, within DVU0453 at 519.796 kb on + strand, within DVU0453 at 519.833 kb on + strand, within DVU0453 at 519.872 kb on + strand, within DVU0453
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with N2 gas (N) remove 516,719 + DVU0451 0.53 +3.1 516,727 - DVU0451 0.53 +2.4 516,729 + DVU0451 0.53 +2.4 516,739 + DVU0451 0.54 +2.4 516,812 + DVU0451 0.58 +2.5 516,841 - DVU0451 0.59 +2.4 516,971 + DVU0451 0.67 +2.0 516,985 - DVU0451 0.67 +2.4 516,995 - DVU0451 0.68 +2.8 517,024 + DVU0451 0.69 +2.5 517,062 - DVU0451 0.72 +3.4 517,062 - DVU0451 0.72 +1.8 517,096 - DVU0451 0.73 +2.8 517,096 - DVU0451 0.73 +2.7 517,158 + DVU0451 0.77 +2.6 517,205 + DVU0451 0.79 +2.5 517,267 - DVU0451 0.83 +2.6 517,268 + DVU0451 0.83 +2.4 517,365 + DVU0451 0.88 +2.5 517,423 + +2.3 517,423 + +2.4 517,446 - +1.9 517,457 + +2.4 517,531 + +1.9 517,539 - +2.8 517,539 - +2.4 517,539 - +2.6 517,614 + -0.3 517,622 + -0.2 517,639 - +0.5 517,683 + +2.6 517,760 - +0.2 517,798 + +0.9 517,833 + +0.2 517,838 + -0.2 517,840 - DVU0452 0.10 +0.2 517,851 - DVU0452 0.11 +1.0 517,893 + DVU0452 0.14 -0.2 517,955 - DVU0452 0.20 +0.1 518,180 - DVU0452 0.38 -0.3 518,208 + DVU0452 0.40 -0.5 518,234 - DVU0452 0.42 +0.5 518,257 - DVU0452 0.44 -0.2 518,259 - DVU0452 0.44 -0.1 518,301 + DVU0452 0.48 -1.6 518,331 - DVU0452 0.50 -0.2 518,406 - DVU0452 0.56 +0.8 518,444 + DVU0452 0.59 +0.2 518,473 + DVU0452 0.62 +0.0 518,563 + DVU0452 0.69 +0.2 518,618 - DVU0452 0.74 -0.3 518,622 + DVU0452 0.74 -0.6 518,625 - DVU0452 0.74 +1.0 518,660 + DVU0452 0.77 +0.8 518,668 - DVU0452 0.78 +0.1 518,939 - +0.8 518,941 + -0.3 518,941 + -0.2 518,941 + +0.2 518,941 + +0.0 518,942 + -0.3 518,969 - -0.4 519,045 - +0.8 519,086 + +0.6 519,147 - -0.6 519,152 + -0.0 519,181 - -0.1 519,319 - -0.2 519,344 - -0.4 519,377 + -1.1 519,409 + +1.0 519,409 + -0.9 519,409 + -0.4 519,479 - -0.2 519,707 - -0.3 519,707 - -0.1 519,709 - DVU0453 0.10 -0.5 519,796 + DVU0453 0.13 -0.3 519,833 + DVU0453 0.14 -0.4 519,872 + DVU0453 0.15 +0.1
Or see this region's nucleotide sequence