Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5631

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
57,106	+		Pf1N1B4_5629	0.47	-0.9
57,107	-		Pf1N1B4_5629	0.48	+0.1
57,110	-		Pf1N1B4_5629	0.48	-2.1
57,229	-		Pf1N1B4_5629	0.55	-1.0
57,512	+		Pf1N1B4_5629	0.73	-1.2
57,769	-		Pf1N1B4_5629	0.90	-1.4
57,894	+				-1.5
58,002	-		Pf1N1B4_5630	0.37	+0.1
58,078	+				-1.7
58,078	+				+0.1
58,079	-				-2.1
58,082	+				+0.1
58,082	+				+0.1
58,083	-				-0.7
58,083	-				+0.1
58,083	-				-2.7
58,142	-				-2.0
58,557	-		Pf1N1B4_5631	0.32	-3.4
58,557	-		Pf1N1B4_5631	0.32	-2.3
58,557	-		Pf1N1B4_5631	0.32	-2.8
58,732	-		Pf1N1B4_5631	0.45	+0.1
58,732	-		Pf1N1B4_5631	0.45	+0.1
58,732	-		Pf1N1B4_5631	0.45	+0.1
59,048	+		Pf1N1B4_5631	0.67	+0.1
59,251	+		Pf1N1B4_5631	0.81	+0.1
59,251	+		Pf1N1B4_5631	0.81	-3.0
59,252	-		Pf1N1B4_5631	0.81	+0.1
59,474	+				-1.6
59,475	-				-1.5
59,525	+				+0.1
59,525	+				-2.6
59,526	-				+0.1
60,454	+		Pf1N1B4_5632	0.45	-1.5