Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5340

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
83,011	+		Pf1N1B4_5338	0.54	+0.2
83,011	+		Pf1N1B4_5338	0.54	-0.7
83,012	-		Pf1N1B4_5338	0.54	+0.2
83,012	-		Pf1N1B4_5338	0.54	+0.2
83,186	+				+0.2
83,397	+				-1.9
83,398	-				+0.2
83,513	+				-2.7
83,513	+				-1.3
83,514	-				+0.2
83,514	-				-4.1
83,514	-				+0.2
83,534	+				-2.0
83,645	+				+0.2
83,645	+				-0.3
83,646	-				-2.3
83,646	-				+0.2
83,646	-				-1.7
83,646	-				-3.0
83,646	-				-1.4
83,677	+				+0.2
83,677	+				+0.2
83,677	+				+0.2
83,677	+				+0.2
83,677	+				+0.2
83,678	-				+0.2
83,678	-				-2.1
83,678	-				+0.1
83,678	-				+0.2
83,708	+				+0.2
83,708	+				+0.2
83,783	-				+0.2
83,835	+				+0.2
83,836	-				-1.9
83,879	+				+0.2
84,023	+		Pf1N1B4_5340	0.20	+0.2
84,023	+		Pf1N1B4_5340	0.20	+0.2
84,187	+		Pf1N1B4_5340	0.66	-2.6
84,187	+		Pf1N1B4_5340	0.66	-2.3
84,187	+		Pf1N1B4_5340	0.66	-1.9
84,188	-		Pf1N1B4_5340	0.66	+0.2
84,188	-		Pf1N1B4_5340	0.66	+0.2
84,188	-		Pf1N1B4_5340	0.66	+0.2
84,580	+				+0.2
84,580	+				+0.2
84,580	+				+0.2
84,581	-				+0.2
84,643	-				+0.2
84,696	+		Pf1N1B4_5341	0.17	-2.2
84,907	+				-1.6
84,907	+				-4.0
84,907	+				-1.8
84,908	-				-0.4
85,007	+		Pf1N1B4_5342	0.39	-2.6
85,007	+		Pf1N1B4_5342	0.39	+0.2
85,125	-				+0.2
85,128	+				+0.2
85,129	+				-1.0
85,129	+				+0.2
85,129	+				-1.9
85,130	-				+0.2