Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4429

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
4,888,391	+		Pf1N1B4_4427	0.88	-0.1
4,888,395	+		Pf1N1B4_4427	0.89	-0.1
4,888,395	+		Pf1N1B4_4427	0.89	-0.1
4,888,763	-		Pf1N1B4_4428	0.35	-0.1
4,889,305	+				-0.1
4,889,556	+		Pf1N1B4_4429	0.39	-0.1
4,889,557	-		Pf1N1B4_4429	0.39	-0.1
4,889,649	+		Pf1N1B4_4429	0.54	-0.1
4,889,649	+		Pf1N1B4_4429	0.54	-2.7
4,889,649	+		Pf1N1B4_4429	0.54	-0.1
4,889,877	+				-0.1
4,889,877	+				-2.0
4,889,878	-				-0.1
4,889,878	-				-0.1
4,889,914	-				-1.6
4,890,185	-				-0.1
4,890,185	-				-0.1
4,890,274	-		Pf1N1B4_4430	0.13	-3.1
4,890,292	+		Pf1N1B4_4430	0.14	-0.1
4,890,293	-		Pf1N1B4_4430	0.14	-0.1
4,890,555	-		Pf1N1B4_4430	0.23	-0.8
4,890,860	+		Pf1N1B4_4430	0.34	-1.9