Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4286

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
4,750,383	+				-0.1
4,750,432	+		Pf1N1B4_4285	0.13	-0.6
4,750,535	+		Pf1N1B4_4285	0.24	-4.1
4,750,645	+				-0.1
4,750,645	+		Pf1N1B4_4285	0.36	-4.4
4,750,645	+		Pf1N1B4_4285	0.36	-0.1
4,750,739	-		Pf1N1B4_4285	0.46	-1.1
4,750,849	+		Pf1N1B4_4285	0.58	-3.1
4,751,236	+				-0.1
4,751,237	-				-0.1
4,751,261	+				-0.1
4,751,261	+				-0.1
4,751,262	-				-0.1
4,751,262	-				-0.1
4,751,262	-				-0.1
4,751,299	+				-0.1
4,751,383	+				-0.1
4,751,536	+		Pf1N1B4_4286	0.15	-0.1
4,751,849	-		Pf1N1B4_4286	0.35	-1.5
4,751,962	+		Pf1N1B4_4286	0.42	-0.1
4,751,962	+		Pf1N1B4_4286	0.42	-0.1
4,751,962	+		Pf1N1B4_4286	0.42	-2.7
4,751,962	+		Pf1N1B4_4286	0.42	-1.6
4,751,962	+		Pf1N1B4_4286	0.42	-0.1
4,751,963	-		Pf1N1B4_4286	0.42	-0.1
4,751,963	-		Pf1N1B4_4286	0.42	-3.6
4,751,963	-		Pf1N1B4_4286	0.42	-0.1
4,752,031	+		Pf1N1B4_4286	0.47	-0.1
4,752,031	+		Pf1N1B4_4286	0.47	-0.1
4,752,031	+		Pf1N1B4_4286	0.47	-0.1
4,752,032	-		Pf1N1B4_4286	0.47	-0.1
4,752,032	-				-0.1
4,752,454	+				-0.1
4,752,497	+		Pf1N1B4_4286	0.76	-2.0
4,752,498	-		Pf1N1B4_4286	0.76	-3.0
4,752,680	-		Pf1N1B4_4286	0.88	-1.7
4,752,687	+		Pf1N1B4_4286	0.88	-0.1
4,752,687	+		Pf1N1B4_4286	0.88	-0.1
4,752,687	+		Pf1N1B4_4286	0.88	-2.0
4,752,687	+		Pf1N1B4_4286	0.88	-0.1
4,752,687	+		Pf1N1B4_4286	0.88	-0.1
4,752,694	+		Pf1N1B4_4286	0.89	-1.5
4,752,694	+		Pf1N1B4_4286	0.89	-2.0
4,752,750	-				-0.1
4,752,914	+				-2.0
4,752,914	+				-1.8
4,752,914	+				-1.6
4,752,915	-				-1.6
4,753,005	+				+0.1
4,753,005	+				-2.3
4,753,005	+				-0.1
4,753,426	+		Pf1N1B4_4287	0.48	-0.1
4,753,427	-		Pf1N1B4_4287	0.48	-0.1
4,753,552	+		Pf1N1B4_4287	0.61	-2.3
4,753,553	-		Pf1N1B4_4287	0.61	-1.6
4,753,561	+		Pf1N1B4_4287	0.62	-0.1
4,753,561	+		Pf1N1B4_4287	0.62	-0.1
4,753,561	+		Pf1N1B4_4287	0.62	-0.1
4,753,562	-		Pf1N1B4_4287	0.62	-2.0
4,753,562	-		Pf1N1B4_4287	0.62	-3.0
4,753,562	-		Pf1N1B4_4287	0.62	-0.1
4,753,562	-		Pf1N1B4_4287	0.62	-0.1
4,753,562	-		Pf1N1B4_4287	0.62	-1.6
4,753,568	-		Pf1N1B4_4287	0.62	-0.1
4,753,639	+		Pf1N1B4_4287	0.69	-0.1
4,753,726	+		Pf1N1B4_4287	0.78	-0.1
4,753,727	-		Pf1N1B4_4287	0.78	-1.4
4,753,727	-		Pf1N1B4_4287	0.78	-0.1
4,753,727	-		Pf1N1B4_4287	0.78	-0.1
4,753,846	-		Pf1N1B4_4287	0.89	-1.9
4,753,867	+				-1.9
4,753,867	+				-0.1
4,753,868	-				-1.8
4,753,868	-				-0.1
4,753,868	-				-1.7
4,753,868	-				-0.1
4,753,869	+				-0.1
4,753,869	+				-0.1
4,753,869	+				-1.6
4,753,870	-				-1.4
4,753,870	-				-0.1
4,753,870	-				-0.1