Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4178

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
4,625,643	+				-1.9
4,625,644	-				-1.2
4,625,644	-				-0.0
4,625,644	-				-0.0
4,625,644	-				-0.0
4,625,825	+		Pf1N1B4_4177	0.20	-0.0
4,625,826	-		Pf1N1B4_4177	0.20	-0.0
4,626,056	+		Pf1N1B4_4177	0.51	-1.9
4,626,057	-		Pf1N1B4_4177	0.51	-2.1
4,626,389	+				-1.6
4,626,425	+				-0.0
4,626,453	+				-0.0
4,626,453	+				-0.0
4,626,695	-				-0.0
4,626,754	+				-0.0
4,626,794	-		Pf1N1B4_4178	0.12	-2.2
4,626,922	+		Pf1N1B4_4178	0.19	-0.0
4,626,923	-		Pf1N1B4_4178	0.19	-0.0
4,627,025	+		Pf1N1B4_4178	0.24	-3.5
4,627,027	+		Pf1N1B4_4178	0.25	-0.0
4,627,068	-		Pf1N1B4_4178	0.27	-0.0
4,627,068	-		Pf1N1B4_4178	0.27	-0.0
4,627,126	+		Pf1N1B4_4178	0.30	-0.0
4,627,198	-		Pf1N1B4_4178	0.34	-0.0
4,627,361	+		Pf1N1B4_4178	0.43	-0.0
4,627,362	-				-0.0
4,627,531	-				-1.8
4,627,531	-		Pf1N1B4_4178	0.53	-2.8
4,627,834	+		Pf1N1B4_4178	0.70	-0.0
4,627,834	+		Pf1N1B4_4178	0.70	-1.3
4,628,328	-				-2.6
4,628,391	+				-0.6
4,628,515	+				-0.9
4,628,516	-				-0.0
4,628,521	+				-0.0
4,628,711	+		Pf1N1B4_4179	0.31	-0.0
4,628,711	+		Pf1N1B4_4179	0.31	-3.1
4,628,712	-		Pf1N1B4_4179	0.31	-0.0
4,628,741	+		Pf1N1B4_4179	0.36	-2.8
4,628,806	-				-0.2
4,628,885	+		Pf1N1B4_4179	0.61	-1.1
4,628,953	+		Pf1N1B4_4179	0.72	-0.0
4,628,954	-				-1.9
4,629,149	+				-0.0
4,629,149	+				-0.0