Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4144

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
4,588,295	+				+0.0
4,588,296	-				-2.1
4,588,424	+				+0.0
4,588,424	+				+0.0
4,588,425	-				+0.0
4,588,425	-				-1.5
4,588,437	-				+0.0
4,588,464	-				+0.0
4,588,528	+				+0.0
4,588,632	-				+0.0
4,588,675	-				+0.0
4,588,675	-				-0.9
4,588,809	-		Pf1N1B4_4143	0.36	+0.6
4,588,865	+		Pf1N1B4_4143	0.54	-1.9
4,588,865	+		Pf1N1B4_4143	0.54	+0.0
4,588,866	-		Pf1N1B4_4143	0.54	+0.0
4,588,866	-		Pf1N1B4_4143	0.54	+0.0
4,588,866	-				-1.2
4,588,926	+		Pf1N1B4_4143	0.74	-2.1
4,588,979	-				+0.0
4,589,053	+				+1.0
4,589,054	-				+0.0
4,589,054	-				+0.0
4,589,058	-				+0.0
4,589,058	-				-2.0
4,589,058	-				+0.0
4,589,058	-				+0.0
4,589,058	-				-1.3
4,589,069	-				+0.0
4,589,168	+				+0.0
4,589,168	+				+0.0
4,589,169	-				+0.0
4,589,198	+				+0.0
4,589,199	-				-2.0
4,589,248	+		Pf1N1B4_4144	0.18	+0.0
4,589,339	+				+0.0
4,589,433	+				+0.0
4,589,433	+				-2.9
4,589,433	+				+0.0
4,589,434	-				-1.7
4,589,528	+				+0.0
4,589,566	+				+0.0
4,589,567	-				-1.2
4,589,678	-				+0.1
4,589,721	+				-2.3
4,589,839	-				-2.2
4,589,870	-				+0.0
4,589,896	+				+0.0
4,589,896	+				+0.0
4,589,897	-				+0.0
4,589,897	-				-1.3
4,589,897	-				-2.6
4,589,900	-				-0.7
4,590,095	+				+0.0
4,590,096	-				+0.0
4,590,096	-				-1.3
4,590,138	-				+0.0
4,590,140	-				-1.0
4,590,230	-				-2.4
4,590,268	+				+0.0
4,590,340	-				+0.0