Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4102

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
4,549,877	-		Pf1N1B4_4101	0.12	-1.2
4,549,881	-		Pf1N1B4_4101	0.12	-1.4
4,549,909	-		Pf1N1B4_4101	0.16	-0.0
4,550,033	+		Pf1N1B4_4101	0.31	-0.0
4,550,033	+		Pf1N1B4_4101	0.31	-0.0
4,550,034	-		Pf1N1B4_4101	0.32	-1.2
4,550,061	+		Pf1N1B4_4101	0.35	-1.4
4,550,062	-		Pf1N1B4_4101	0.35	-1.0
4,550,099	-				-0.0
4,550,099	-		Pf1N1B4_4101	0.40	-0.6
4,550,099	-		Pf1N1B4_4101	0.40	-1.5
4,550,099	-		Pf1N1B4_4101	0.40	-1.2
4,550,099	-		Pf1N1B4_4101	0.40	-0.0
4,550,099	-				-1.4
4,550,121	-		Pf1N1B4_4101	0.43	-3.0
4,550,381	+		Pf1N1B4_4101	0.75	-0.0
4,550,382	-		Pf1N1B4_4101	0.76	-1.5
4,550,387	-		Pf1N1B4_4101	0.76	-1.1
4,550,402	+		Pf1N1B4_4101	0.78	-0.0
4,550,402	+		Pf1N1B4_4101	0.78	-0.6
4,550,402	+		Pf1N1B4_4101	0.78	-1.3
4,550,403	-		Pf1N1B4_4101	0.78	-0.9
4,550,403	-		Pf1N1B4_4101	0.78	-0.0
4,550,590	+				-0.0
4,550,630	+				-0.0
4,550,921	+		Pf1N1B4_4102	0.64	-1.7
4,550,921	+		Pf1N1B4_4102	0.64	-0.0
4,550,921	+		Pf1N1B4_4102	0.64	-2.8
4,550,922	-		Pf1N1B4_4102	0.65	-0.0
4,550,922	-		Pf1N1B4_4102	0.65	-0.0
4,550,979	+		Pf1N1B4_4102	0.79	-0.0
4,551,220	+				-2.2
4,551,461	+		Pf1N1B4_4103	0.14	-0.0
4,551,462	-		Pf1N1B4_4103	0.14	-0.0
4,551,462	-		Pf1N1B4_4103	0.14	-0.6
4,551,499	-		Pf1N1B4_4103	0.19	-1.0
4,551,653	-				-1.0
4,551,675	+		Pf1N1B4_4103	0.40	-0.0