Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3934

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
4,369,934	-				+0.0
4,369,938	+				-0.9
4,369,939	-				-1.4
4,369,985	+				+0.0
4,369,985	+				+0.0
4,369,986	-				+0.0
4,369,986	-				+0.0
4,369,986	-				+0.0
4,369,987	+				+0.0
4,369,987	+				+0.0
4,370,005	-				+1.0
4,370,035	+				-0.6
4,370,036	-				-1.8
4,370,036	-				+0.0
4,370,036	-				+0.0
4,370,046	-				-2.0
4,370,264	+		Pf1N1B4_3933	0.46	+0.0
4,370,426	+		Pf1N1B4_3933	0.78	+0.0
4,370,439	-		Pf1N1B4_3933	0.80	+0.0
4,370,439	-				+0.0
4,370,439	-				+0.0
4,370,522	+				+0.0
4,370,522	+				-1.0
4,370,522	+				-2.3
4,370,522	+				+0.0
4,370,523	-				-1.7
4,370,537	+				+0.0
4,370,572	+				+0.0
4,370,606	+				-0.3
4,370,607	-				+0.0
4,370,631	+				-1.0
4,370,632	-				+0.0
4,370,931	-		Pf1N1B4_3934	0.23	+0.0
4,371,016	+		Pf1N1B4_3934	0.30	-2.0
4,371,016	+		Pf1N1B4_3934	0.30	+0.0
4,371,069	-		Pf1N1B4_3934	0.35	+0.0
4,371,083	+				-1.5
4,371,084	-		Pf1N1B4_3934	0.36	+0.0
4,371,236	-		Pf1N1B4_3934	0.48	-1.9
4,371,236	-		Pf1N1B4_3934	0.48	+2.0
4,371,361	-		Pf1N1B4_3934	0.58	+0.0
4,371,361	-		Pf1N1B4_3934	0.58	+0.0
4,371,361	-		Pf1N1B4_3934	0.58	+0.0
4,371,528	+		Pf1N1B4_3934	0.72	-2.1
4,371,528	+		Pf1N1B4_3934	0.72	+0.0
4,371,570	-		Pf1N1B4_3934	0.75	-2.1
4,371,617	-		Pf1N1B4_3934	0.79	+0.0
4,371,617	-		Pf1N1B4_3934	0.79	-3.7
4,371,893	+				+0.0
4,371,897	-				+0.0
4,371,968	+				+0.0
4,371,969	-				-0.2
4,372,004	+				+0.0
4,372,004	+				+0.5
4,372,004	+				+0.0
4,372,005	-				-1.6
4,372,005	-				-1.9
4,372,130	-				-2.0
4,372,157	-				-0.9
4,372,391	+		Pf1N1B4_3935	0.16	+0.0
4,372,581	-		Pf1N1B4_3935	0.32	-1.4
4,372,735	+				+0.0
4,372,735	+				+0.0
4,372,736	-		Pf1N1B4_3935	0.45	-0.4
4,372,740	-				+0.0
4,372,874	+		Pf1N1B4_3935	0.57	+0.0
4,372,874	+		Pf1N1B4_3935	0.57	-1.6
4,372,874	+		Pf1N1B4_3935	0.57	-1.8
4,372,875	-		Pf1N1B4_3935	0.57	+0.0