Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3624

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
4,031,604	+		Pf1N1B4_3622	0.82	-0.0
4,031,666	+		Pf1N1B4_3622	0.84	-0.0
4,031,666	+		Pf1N1B4_3622	0.84	-0.0
4,031,667	-				-0.0
4,031,667	-		Pf1N1B4_3622	0.84	-0.0
4,031,720	+		Pf1N1B4_3622	0.87	-0.0
4,031,721	-				-0.0
4,031,730	+				-0.0
4,032,009	-				-0.0
4,032,017	+				-0.0
4,032,144	+		Pf1N1B4_3623	0.31	-0.0
4,032,145	-		Pf1N1B4_3623	0.31	+1.0
4,032,340	-		Pf1N1B4_3623	0.76	-0.0
4,032,340	-		Pf1N1B4_3623	0.76	-0.0
4,032,744	-		Pf1N1B4_3624	0.36	-1.6
4,032,755	+		Pf1N1B4_3624	0.37	-1.7
4,033,047	+		Pf1N1B4_3624	0.69	-1.3
4,033,048	-		Pf1N1B4_3624	0.69	-1.5
4,033,048	-		Pf1N1B4_3624	0.69	-0.0
4,033,067	+		Pf1N1B4_3624	0.71	-0.0
4,033,067	+		Pf1N1B4_3624	0.71	-0.0
4,033,067	+		Pf1N1B4_3624	0.71	-0.0
4,033,067	+		Pf1N1B4_3624	0.71	-0.0
4,033,068	-		Pf1N1B4_3624	0.71	-0.0
4,033,068	-		Pf1N1B4_3624	0.71	-1.3
4,033,102	+		Pf1N1B4_3624	0.75	-0.0
4,033,103	-		Pf1N1B4_3624	0.75	-0.0
4,033,172	+		Pf1N1B4_3624	0.82	-0.0
4,033,173	-		Pf1N1B4_3624	0.82	-0.0
4,033,251	+				-0.0
4,033,251	+				-0.0
4,033,251	+				-0.0
4,033,307	+				-0.0
4,033,307	+				-0.0
4,033,340	-				-1.0
4,033,340	-				-0.0
4,033,342	+				-1.0
4,033,342	+				-2.5
4,033,342	+				-0.0
4,033,343	-				-0.1
4,033,358	+				-1.2
4,033,358	+				-0.0
4,033,362	+				-1.5
4,033,362	+				+1.1
4,033,362	+				-1.0
4,033,362	+				-0.9
4,033,362	+				-0.0
4,033,362	+				-0.0
4,033,362	+				-0.0
4,033,362	+				+0.1
4,033,363	-				-0.0
4,033,363	-				-0.0
4,033,363	-				-0.0
4,033,428	-				-0.0
4,033,431	+				-0.0
4,033,431	+				-0.7
4,033,431	+				-1.8
4,033,431	+				-0.0
4,033,432	-				-0.0
4,033,432	-				-0.0
4,033,432	-				+1.6
4,033,449	+				-0.0
4,033,449	+				-0.0
4,033,679	+		Pf1N1B4_3625	0.15	-0.0
4,033,679	+		Pf1N1B4_3625	0.15	-2.6
4,033,679	+				-0.0
4,033,680	-				-0.7
4,033,811	+		Pf1N1B4_3625	0.34	-0.0
4,033,811	+		Pf1N1B4_3625	0.34	-0.0
4,033,811	+		Pf1N1B4_3625	0.34	-0.0
4,034,066	+		Pf1N1B4_3625	0.69	-1.5
4,034,067	-				-0.0
4,034,067	-		Pf1N1B4_3625	0.70	-0.0
4,034,071	+		Pf1N1B4_3625	0.70	-0.0
4,034,134	+		Pf1N1B4_3625	0.79	-2.2
4,034,196	+		Pf1N1B4_3625	0.88	-0.0
4,034,279	+				-0.0
4,034,279	+				-1.9
4,034,279	+				-0.0
4,034,279	+				-0.0
4,034,279	+				-0.0
4,034,280	-				-0.0
4,034,296	-				-0.3
4,034,296	-				-1.7
4,034,296	-				-0.0
4,034,304	+				-3.1
4,034,305	-				-0.0
4,034,305	-				-1.5