Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3445

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A
3,840,539	+				-0.0
3,840,539	+				-2.3
3,840,540	-				-0.0
3,840,542	+				-0.0
3,840,542	+				-2.2
3,840,554	+				-0.0
3,840,680	-				-0.0
3,840,748	+				-1.2
3,840,756	-				-0.0
3,840,759	+				-0.0
3,840,759	+				-0.1
3,840,851	-				-0.2
3,841,244	+		Pf1N1B4_3445	0.33	-0.0
3,841,354	+		Pf1N1B4_3445	0.41	-4.1
3,841,504	+		Pf1N1B4_3445	0.52	-3.5
3,841,505	-		Pf1N1B4_3445	0.52	-0.0
3,841,589	-				-0.8
3,841,589	-		Pf1N1B4_3445	0.59	-2.7
3,841,723	+		Pf1N1B4_3445	0.69	-0.0
3,842,173	+				-0.0
3,842,304	+		Pf1N1B4_3446	0.48	-0.5
3,842,305	-		Pf1N1B4_3446	0.48	-0.0
3,842,330	+		Pf1N1B4_3446	0.57	-1.2
3,842,363	-		Pf1N1B4_3446	0.68	-0.0
3,842,371	-		Pf1N1B4_3446	0.71	-0.0
3,842,371	-		Pf1N1B4_3446	0.71	-0.0
3,842,467	+				-0.0
3,842,467	+				-0.0
3,842,467	+				-0.0
3,842,467	+				+0.3
3,842,467	+				-1.5
3,842,468	-				-0.0
3,842,909	+		Pf1N1B4_3447	0.44	-0.0
3,842,960	+		Pf1N1B4_3447	0.49	-0.8
3,843,046	+		Pf1N1B4_3447	0.57	-1.0
3,843,071	+		Pf1N1B4_3447	0.60	-0.0
3,843,071	+		Pf1N1B4_3447	0.60	-0.0
3,843,071	+		Pf1N1B4_3447	0.60	-0.0
3,843,071	+		Pf1N1B4_3447	0.60	-0.0
3,843,071	+				-1.0
3,843,071	+				-0.0
3,843,071	+		Pf1N1B4_3447	0.60	-2.9
3,843,072	-		Pf1N1B4_3447	0.60	-0.0
3,843,072	-				-1.0
3,843,072	-		Pf1N1B4_3447	0.60	-3.2
3,843,072	-		Pf1N1B4_3447	0.60	-0.0
3,843,073	+		Pf1N1B4_3447	0.60	-0.0
3,843,073	+		Pf1N1B4_3447	0.60	-0.0
3,843,074	-		Pf1N1B4_3447	0.60	-0.0
3,843,074	-		Pf1N1B4_3447	0.60	-0.0
3,843,077	+		Pf1N1B4_3447	0.60	-0.0
3,843,077	+		Pf1N1B4_3447	0.60	-1.5
3,843,077	+		Pf1N1B4_3447	0.60	-1.1
3,843,077	+				-0.0
3,843,078	-		Pf1N1B4_3447	0.60	-0.0
3,843,078	-		Pf1N1B4_3447	0.60	-0.0
3,843,078	-		Pf1N1B4_3447	0.60	-2.6
3,843,078	-				-0.0
3,843,078	-		Pf1N1B4_3447	0.60	-0.0